RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 SYT10Q6XYQ8 523 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 LIMS2Q7Z4I7 341 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 TAF4BQ92750 862 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 SYN2Q92777 582 aaPredicted RBP10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 EIF3CQ99613 913 aaKnown RBP10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 PBX4Q9BYU1 374 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 EDEM3Q9BZQ6 932 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 SMARCAL1Q9NZC9 954 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 NLRC5Q86WI3 1866 aa10.08□□□□□ -0.8
HMGCLL1-206ENST00000428842 F8VP50 259 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 SRGAP2O75044 1071 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 P4HA1P13674 534 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 CTNNB1P35222 781 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 PNPLA4P41247 253 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 NOP2P46087 812 aaKnown RBP10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 ATXN1P54253 815 aaKnown RBP10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 ETF1P62495 437 aaKnown RBP10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 ENPEPQ07075 957 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 CAMK1Q14012 370 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 TRNP1Q6NT89 227 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 SCN4BQ8IWT1 228 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 TTC16Q8NEE8 873 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 JOSD2Q8TAC2 188 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 ADAM32Q8TC27 787 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 HERVK_113Q902F9 699 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 ZNF653Q96CK0 615 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 SMOQ99835 787 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 FAM53CQ9NYF3 392 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 EHD2Q9NZN4 543 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 KANSL3Q9P2N6 904 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 NENFQ9UMX5 172 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 SSU72P8A0A1W2PR75 194 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 SCAMP3O14828 347 aaKnown RBP10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 GRM6O15303 877 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 CPB1P15086 417 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 CYLC1P35663 651 aaPredicted RBP10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 USP46P62068 366 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 POU5F1Q01860 360 aaKnown RBP10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 DUSP4Q13115 394 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 ZNF569Q5MCW4 686 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 PLPP4Q5VZY2 271 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 KIAA1841Q6NSI8 718 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 CLEC20AQ6ZU45 233 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 HFE2Q6ZVN8 426 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 ENOSF1Q7L5Y1 443 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 SLC39A11Q8N1S5 342 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 FIBCD1Q8N539 461 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 TOP6BLQ8N6T0 577 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 SLC35G2Q8TBE7 412 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 GIPC2Q8TF65 315 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 GDPD5Q8WTR4 605 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 ARNTL2Q8WYA1 636 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 TMEM169Q96HH4 297 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 CLSTN3Q9BQT9 956 aa10.07□□□□□ -0.8
HMGCLL1-206ENST00000428842 SYNJ2BP-COX16A0A087WUM0 186 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 WDR27A2RRH5 827 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 TACC1O75410 805 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 AP1G2O75843 785 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 PARNO95453 639 aaKnown RBP10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 RFX1P22670 979 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 NSFP46459 744 aaKnown RBP10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 MARCKSL1P49006 195 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 HTRA4P83105 476 aaPredicted RBP10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 OGDHQ02218 1023 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 ADCY1Q08828 1119 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 PTP4A2Q12974 167 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 PDCLQ13371 301 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 BMS1Q14692 1282 aaKnown RBP10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 ELF2Q15723 593 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 ARHGAP29Q52LW3 1261 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 ZNF697Q5TEC3 545 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 AADACL2Q6P093 401 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 PSRC1Q6PGN9 363 aaPredicted RBP10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 SLC35F6Q8N357 371 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 ZNF558Q96NG5 402 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 SEPT5Q99719 369 aaPredicted RBP10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 NKX2-4Q9H2Z4 354 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 TMPRSS4Q9NRS4 437 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 KLHL11Q9NVR0 708 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 ADAM22Q9P0K1 906 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 COX16Q9P0S2 106 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 DNAI1Q9UI46 699 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 BAIAP3O94812 1187 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 SEC24AO95486 1093 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 STAU1O95793 577 aaKnown RBP10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 CYP1A1P04798 512 aaPredicted RBP10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 WARSP23381 471 aaKnown RBP10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 GJC1P36383 396 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 VAV2P52735 878 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 GNG11P61952 73 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 CDK17Q00537 523 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 FAM35AQ86V20 835 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 PIGZQ86VD9 579 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 MCOLN2Q8IZK6 566 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 RAD9AQ99638 391 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 TTPALQ9BTX7 342 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 APOL5Q9BWW9 433 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 CYP3A43Q9HB55 503 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 CALCOCO1Q9P1Z2 691 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 CNOT8Q9UFF9 292 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms