RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 TRPV5Q9NQA5 729 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 HMGXB4Q9UGU5 601 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 CIZ1Q9ULV3 898 aaPredicted RBP20.45■□□□□ 0.86
COL9A2-204ENST00000427563 CCL26Q9Y258 94 aa20.45■□□□□ 0.86
COL9A2-204ENST00000427563 HELZP42694 1942 aaKnown RBP20.45■□□□□ 0.86
COL9A2-204ENST00000427563 ASS1P00966 412 aaKnown RBP20.44■□□□□ 0.86
COL9A2-204ENST00000427563 ASPAP45381 313 aa20.44■□□□□ 0.86
COL9A2-204ENST00000427563 GCLMP48507 274 aa20.44■□□□□ 0.86
COL9A2-204ENST00000427563 TAF12Q16514 161 aa20.44■□□□□ 0.86
COL9A2-204ENST00000427563 PAQR9Q6ZVX9 377 aa20.44■□□□□ 0.86
COL9A2-204ENST00000427563 ALYREFQ86V81 257 aaKnown RBP20.44■□□□□ 0.86
COL9A2-204ENST00000427563 MAB21L3Q8N8X9 362 aa20.44■□□□□ 0.86
COL9A2-204ENST00000427563 B3GALNT2Q8NCR0 500 aa20.44■□□□□ 0.86
COL9A2-204ENST00000427563 TAS1R2Q8TE23 839 aa20.44■□□□□ 0.86
COL9A2-204ENST00000427563 SHDQ96IW2 340 aa20.44■□□□□ 0.86
COL9A2-204ENST00000427563 ZFYVE19Q96K21 471 aa20.44■□□□□ 0.86
COL9A2-204ENST00000427563 SPATA17Q96L03 361 aa20.44■□□□□ 0.86
COL9A2-204ENST00000427563 SLC22A12Q96S37 553 aa20.44■□□□□ 0.86
COL9A2-204ENST00000427563 ZNF518BQ9C0D4 1074 aa20.44■□□□□ 0.86
COL9A2-204ENST00000427563 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.44■□□□□ 0.86
COL9A2-204ENST00000427563 TRIM49BA6NDI0 452 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 A8MXQ7 604 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 CD44P16070 742 aaKnown RBP20.43■□□□□ 0.86
COL9A2-204ENST00000427563 BMP6P22004 513 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 RFX1P22670 979 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 PSMC2P35998 433 aaKnown RBP20.43■□□□□ 0.86
COL9A2-204ENST00000427563 UBXN2BQ14CS0 331 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 MAPRE1Q15691 268 aaKnown RBP20.43■□□□□ 0.86
COL9A2-204ENST00000427563 ANKRD40Q6AI12 368 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 VSTM1Q6UX27 236 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 INTS8Q75QN2 995 aaKnown RBP20.43■□□□□ 0.86
COL9A2-204ENST00000427563 ELOA2Q8IYF1 753 aaPredicted RBP20.43■□□□□ 0.86
COL9A2-204ENST00000427563 CMTM8Q8IZV2 173 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 ADSSL1Q8N142 457 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 IRF7Q92985 503 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 USP13Q92995 863 aaPredicted RBP20.43■□□□□ 0.86
COL9A2-204ENST00000427563 E2F7Q96AV8 911 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 GCNAQ96QF7 691 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 RMND1Q9NWS8 449 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 OBP2AQ9NY56 170 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 MAN1B1Q9UKM7 699 aa20.43■□□□□ 0.86
COL9A2-204ENST00000427563 FAM170BA6NMN3 283 aa20.42■□□□□ 0.86
COL9A2-204ENST00000427563 F8VP50 259 aa20.42■□□□□ 0.86
COL9A2-204ENST00000427563 ZNF263O14978 683 aa20.42■□□□□ 0.86
COL9A2-204ENST00000427563 CHADO15335 359 aa20.42■□□□□ 0.86
COL9A2-204ENST00000427563 RPL13P26373 211 aaKnown RBP20.42■□□□□ 0.86
COL9A2-204ENST00000427563 PIK3CAP42336 1068 aa20.42■□□□□ 0.86
COL9A2-204ENST00000427563 ENPEPQ07075 957 aa20.42■□□□□ 0.86
COL9A2-204ENST00000427563 ORC1Q13415 861 aa20.42■□□□□ 0.86
COL9A2-204ENST00000427563 ANGPT1Q15389 498 aa20.42■□□□□ 0.86
COL9A2-204ENST00000427563 SGSM1Q2NKQ1 1148 aa20.42■□□□□ 0.86
COL9A2-204ENST00000427563 WDR44Q5JSH3 913 aa20.42■□□□□ 0.86
COL9A2-204ENST00000427563 ISM2Q6H9L7 571 aa20.42■□□□□ 0.86
COL9A2-204ENST00000427563 MON1AQ86VX9 555 aa20.42■□□□□ 0.86
COL9A2-204ENST00000427563 MAML2Q8IZL2 1156 aaPredicted RBP20.42■□□□□ 0.86
COL9A2-204ENST00000427563 SEMA4DQ92854 862 aa20.42■□□□□ 0.86
COL9A2-204ENST00000427563 SMARCE1Q969G3 411 aa20.42■□□□□ 0.86
COL9A2-204ENST00000427563 FANCMQ8IYD8 2048 aa20.41■□□□□ 0.86
COL9A2-204ENST00000427563 GRIK1P39086 918 aa20.41■□□□□ 0.86
COL9A2-204ENST00000427563 SOX9P48436 509 aa20.41■□□□□ 0.86
COL9A2-204ENST00000427563 MRE11P49959 708 aa20.41■□□□□ 0.86
COL9A2-204ENST00000427563 BPIFB1Q8TDL5 484 aa20.41■□□□□ 0.86
COL9A2-204ENST00000427563 ATOH1Q92858 354 aaPredicted RBP20.41■□□□□ 0.86
COL9A2-204ENST00000427563 CCDC34Q96HJ3 373 aa20.41■□□□□ 0.86
COL9A2-204ENST00000427563 C8orf48Q96LL4 319 aa20.41■□□□□ 0.86
COL9A2-204ENST00000427563 TWNKQ96RR1 684 aa20.41■□□□□ 0.86
COL9A2-204ENST00000427563 TTLL2Q9BWV7 592 aa20.41■□□□□ 0.86
COL9A2-204ENST00000427563 BCO2Q9BYV7 579 aa20.41■□□□□ 0.86
COL9A2-204ENST00000427563 OSBPL6Q9BZF3 934 aa20.41■□□□□ 0.86
COL9A2-204ENST00000427563 MMRN2Q9H8L6 949 aa20.41■□□□□ 0.86
COL9A2-204ENST00000427563 GCNT4Q9P109 453 aa20.41■□□□□ 0.86
COL9A2-204ENST00000427563 C2orf78A6NCI8 922 aa20.4■□□□□ 0.86
COL9A2-204ENST00000427563 SMC2O95347 1197 aa20.4■□□□□ 0.86
COL9A2-204ENST00000427563 DDX6P26196 483 aaKnown RBP eCLIP20.4■□□□□ 0.86
COL9A2-204ENST00000427563 MYH10P35580 1976 aa20.4■□□□□ 0.86
COL9A2-204ENST00000427563 NDST1P52848 882 aa20.4■□□□□ 0.86
COL9A2-204ENST00000427563 TNK2Q07912 1038 aa20.4■□□□□ 0.86
COL9A2-204ENST00000427563 ACOT1Q86TX2 421 aa20.4■□□□□ 0.86
COL9A2-204ENST00000427563 MRPS31Q92665 395 aaKnown RBP20.4■□□□□ 0.86
COL9A2-204ENST00000427563 TAF4BQ92750 862 aa20.4■□□□□ 0.86
COL9A2-204ENST00000427563 CLDN23Q96B33 292 aa20.4■□□□□ 0.86
COL9A2-204ENST00000427563 CYP2S1Q96SQ9 504 aa20.4■□□□□ 0.86
COL9A2-204ENST00000427563 TMEM8AQ9HCN3 771 aa20.4■□□□□ 0.86
COL9A2-204ENST00000427563 GTSE1Q9NYZ3 720 aa20.4■□□□□ 0.86
COL9A2-204ENST00000427563 CHMP5Q9NZZ3 219 aa20.4■□□□□ 0.86
COL9A2-204ENST00000427563 UXTQ9UBK9 157 aaPredicted RBP20.4■□□□□ 0.86
COL9A2-204ENST00000427563 PIAS3Q9Y6X2 628 aa20.4■□□□□ 0.86
COL9A2-204ENST00000427563 DPYSL4O14531 572 aa20.39■□□□□ 0.85
COL9A2-204ENST00000427563 TRIM66O15016 1216 aa20.39■□□□□ 0.85
COL9A2-204ENST00000427563 KRT13P13646 458 aa20.39■□□□□ 0.85
COL9A2-204ENST00000427563 NOP14P78316 857 aaKnown RBP20.39■□□□□ 0.85
COL9A2-204ENST00000427563 TXNDC11Q6PKC3 985 aa20.39■□□□□ 0.85
COL9A2-204ENST00000427563 ZNF852Q6ZMS4 543 aa20.39■□□□□ 0.85
COL9A2-204ENST00000427563 DENND5BQ6ZUT9 1274 aa20.39■□□□□ 0.85
COL9A2-204ENST00000427563 FAM35AQ86V20 835 aa20.39■□□□□ 0.85
COL9A2-204ENST00000427563 FUKQ8N0W3 1084 aa20.39■□□□□ 0.85
COL9A2-204ENST00000427563 CELF5Q8N6W0 485 aaKnown RBP20.39■□□□□ 0.85
COL9A2-204ENST00000427563 ZMIZ2Q8NF64 920 aa20.39■□□□□ 0.85
COL9A2-204ENST00000427563 TTC8Q8TAM2 541 aa20.39■□□□□ 0.85
COL9A2-204ENST00000427563 WHAMMQ8TF30 809 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms