RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 SYT13Q7L8C5 426 aa13.8□□□□□ -0.2
NELFE-203ENST00000426722 LIMS2Q7Z4I7 341 aa13.8□□□□□ -0.2
NELFE-203ENST00000426722 C12orf50Q8NA57 414 aaPredicted RBP13.8□□□□□ -0.2
NELFE-203ENST00000426722 ACDQ96AP0 544 aa13.8□□□□□ -0.2
NELFE-203ENST00000426722 CNTNAP3BQ96NU0 1288 aa13.8□□□□□ -0.2
NELFE-203ENST00000426722 CNTNAP3Q9BZ76 1288 aa13.8□□□□□ -0.2
NELFE-203ENST00000426722 MTMR12Q9C0I1 747 aa13.8□□□□□ -0.2
NELFE-203ENST00000426722 ARRDC1-AS1Q9H2J1 176 aa13.8□□□□□ -0.2
NELFE-203ENST00000426722 TNMDQ9H2S6 317 aa13.8□□□□□ -0.2
NELFE-203ENST00000426722 CUEDC2Q9H467 287 aa13.8□□□□□ -0.2
NELFE-203ENST00000426722 PCIF1Q9H4Z3 704 aa13.8□□□□□ -0.2
NELFE-203ENST00000426722 GCNT4Q9P109 453 aa13.8□□□□□ -0.2
NELFE-203ENST00000426722 SIX4Q9UIU6 781 aa13.8□□□□□ -0.2
NELFE-203ENST00000426722 KIAA1549LQ6ZVL6 1849 aa13.8□□□□□ -0.2
NELFE-203ENST00000426722 MYO16Q9Y6X6 1858 aa13.8□□□□□ -0.2
NELFE-203ENST00000426722 AXIN1O15169 862 aa13.79□□□□□ -0.2
NELFE-203ENST00000426722 CKMP06732 381 aa13.79□□□□□ -0.2
NELFE-203ENST00000426722 WARSP23381 471 aaKnown RBP13.79□□□□□ -0.2
NELFE-203ENST00000426722 SNRPFP62306 86 aaKnown RBP13.79□□□□□ -0.2
NELFE-203ENST00000426722 AMPD3Q01432 767 aa13.79□□□□□ -0.2
NELFE-203ENST00000426722 CEBPZQ03701 1054 aaKnown RBP13.79□□□□□ -0.2
NELFE-203ENST00000426722 EML3Q32P44 896 aa13.79□□□□□ -0.2
NELFE-203ENST00000426722 AASDHQ4L235 1098 aaPredicted RBP13.79□□□□□ -0.2
NELFE-203ENST00000426722 WDR49Q8IV35 697 aa13.79□□□□□ -0.2
NELFE-203ENST00000426722 SCN4BQ8IWT1 228 aa13.79□□□□□ -0.2
NELFE-203ENST00000426722 RIN3Q8TB24 985 aa13.79□□□□□ -0.2
NELFE-203ENST00000426722 NOC3LQ8WTT2 800 aaKnown RBP13.79□□□□□ -0.2
NELFE-203ENST00000426722 HPDLQ96IR7 371 aa13.79□□□□□ -0.2
NELFE-203ENST00000426722 USP28Q96RU2 1077 aa13.79□□□□□ -0.2
NELFE-203ENST00000426722 SYT15Q9BQS2 421 aa13.79□□□□□ -0.2
NELFE-203ENST00000426722 TRPC7Q9HCX4 862 aa13.79□□□□□ -0.2
NELFE-203ENST00000426722 EBF1Q9UH73 591 aa13.79□□□□□ -0.2
NELFE-203ENST00000426722 ARHGAP26Q9UNA1 814 aa13.79□□□□□ -0.2
NELFE-203ENST00000426722 TRIM66O15016 1216 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 EIF3DO15371 548 aaKnown RBP eCLIP13.78□□□□□ -0.2
NELFE-203ENST00000426722 GDF9O60383 454 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 RHOBTB1O94844 696 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 NFATC1O95644 943 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 HDCP19113 662 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 ANXA13P27216 316 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 NASPP49321 788 aaPredicted RBP13.78□□□□□ -0.2
NELFE-203ENST00000426722 KCNB1Q14721 858 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 PLA2G2CQ5R387 149 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 FAM173BQ6P4H8 233 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 DENND5BQ6ZUT9 1274 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 KBTBD6Q86V97 674 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 C11orf74Q86VG3 221 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 ARL14EPQ8N8R7 260 aaPredicted RBP13.78□□□□□ -0.2
NELFE-203ENST00000426722 STKLD1Q8NE28 680 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 CYP2S1Q96SQ9 504 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 FGFBP2Q9BYJ0 223 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 PANK2Q9BZ23 570 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 FBRSL1Q9HCM7 1045 aaKnown RBP13.78□□□□□ -0.2
NELFE-203ENST00000426722 TRPM5Q9NZQ8 1165 aa13.78□□□□□ -0.2
NELFE-203ENST00000426722 A0A087X0B3 334 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 PPP6R2O75170 966 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 TACC1O75410 805 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 APBB3O95704 486 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 GRIK1P39086 918 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 PXNP49023 591 aaPredicted RBP13.77□□□□□ -0.21
NELFE-203ENST00000426722 DMC1Q14565 340 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 ELF2Q15723 593 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 CNNM4Q6P4Q7 775 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 RPLP0P6Q8NHW5 317 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 MYCBPAPQ8TBZ2 947 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 ZNF507Q8TCN5 953 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 SH3RF2Q8TEC5 729 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 KBTBD7Q8WVZ9 684 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 MYLPFQ96A32 169 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 SLC22A12Q96S37 553 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 TTLL2Q9BWV7 592 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 VPS45Q9NRW7 570 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 KBTBD4Q9NVX7 518 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 HSPBP1Q9NZL4 362 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 MTMR6Q9Y217 621 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 WNT6Q9Y6F9 365 aa13.77□□□□□ -0.21
NELFE-203ENST00000426722 UBE4BO95155 1302 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 TM4SF5O14894 197 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 ATP2C2O75185 946 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 BDNFP23560 247 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 LMO2P25791 158 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 HOXC13P31276 330 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 NOP14P78316 857 aaKnown RBP13.76□□□□□ -0.21
NELFE-203ENST00000426722 SLC7A9P82251 487 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 PSMD2Q13200 908 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 STK38Q15208 465 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 PLK5Q496M5 336 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 LMBRD2Q68DH5 695 aaPredicted RBP13.76□□□□□ -0.21
NELFE-203ENST00000426722 SCARA3Q6AZY7 606 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 TRAPPC11Q7Z392 1133 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 CBWD2Q8IUF1 395 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 PDILTQ8N807 584 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 LINC00301Q8NCQ3 95 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 OR5B17Q8NGF7 314 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 C8orf48Q96LL4 319 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 FNBP1Q96RU3 617 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 MMS19Q96T76 1030 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 TRIM9Q9C026 710 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 CRTAC1Q9NQ79 661 aa13.76□□□□□ -0.21
NELFE-203ENST00000426722 CGNQ9P2M7 1197 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms