RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 YY1P25490 414 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 CCNFP41002 786 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 CDKN2BP42772 138 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 TRMT5Q32P41 509 aaKnown RBP17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 FAM196AQ6ZSG2 479 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 ARID3BQ8IVW6 561 aaPredicted RBP17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 OPTNQ96CV9 577 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 IP6K2Q9UHH9 426 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 PCDHB4Q9Y5E5 795 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 SCINQ9Y6U3 715 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 ASTN2O75129 1339 aaPredicted RBP17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 QSER1Q2KHR3 1735 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 LOXHD1Q8IVV2 1947 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 SERPINB2P05120 415 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 HARSP12081 509 aaKnown RBP17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 ALDH18A1P54886 795 aaKnown RBP17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 SNRPFP62306 86 aaKnown RBP17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 KBTBD12Q3ZCT8 623 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 BRDTQ58F21 947 aaPredicted RBP17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 TFDP3Q5H9I0 405 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 SCARA3Q6AZY7 606 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 MARK2Q7KZI7 788 aaKnown RBP17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 PRPF39Q86UA1 669 aaKnown RBP17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 SMC1BQ8NDV3 1235 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 GSTCDQ8NEC7 633 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 SLC35B2Q8TB61 432 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 ACTL9Q8TC94 416 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 PYDC1Q8WXC3 89 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 MTBPQ96DY7 904 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 APOBEC3GQ9HC16 384 aaKnown RBP17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 PARVAQ9NVD7 372 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 COL20A1Q9P218 1284 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 EXOC7Q9UPT5 735 aa17.44■□□□□ 0.38
NPC1L1-203ENST00000423141 TMEM191CA6NGB0 347 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 HLA-DRAP01903 254 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 TMEM191BP0C7N4 346 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 GTF2H1P32780 548 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 RPL22P35268 128 aaKnown RBP17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 OTUD4Q01804 1114 aaKnown RBP17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 PABPC1LQ4VXU2 614 aaKnown RBP17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 XKR9Q5GH70 373 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 FAM91A1Q658Y4 838 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 CIAPIN1Q6FI81 312 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 RNF111Q6ZNA4 994 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 PHF13Q86YI8 300 aaPredicted RBP17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 ARHGAP18Q8N392 663 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 HAPLN3Q96S86 360 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 CENPKQ9BS16 269 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 TBC1D30Q9Y2I9 924 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 PTPRJQ12913 1337 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 BST1Q10588 318 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 LSAMPQ13449 338 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 UBAP2LQ14157 1087 aaKnown RBP17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 ZYXQ15942 572 aaKnown RBP17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 SMTNL2Q2TAL5 461 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 TDRD10Q5VZ19 366 aaKnown RBP17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 C15orf39Q6ZRI6 1047 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 ACAP3Q96P50 834 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 SRPK1Q96SB4 655 aaKnown RBP17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 TMX4Q9H1E5 349 aaPredicted RBP17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 VCX3BQ9H321 246 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 VCX3AQ9NNX9 186 aa17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 XPO7Q9UIA9 1087 aaKnown RBP17.43■□□□□ 0.38
NPC1L1-203ENST00000423141 TCRBV9S1A1TA0A576 114 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 PRR5-ARHGAP8B1AHC4 643 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 CYB561D2O14569 222 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 HNRNPDLO14979 420 aaKnown RBP17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 OPHN1O60890 802 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 OR6B1O95007 311 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 ELK3P41970 407 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 BPIFB4P59827 614 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 ARHGAP8P85298 464 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 SLC18A2Q05940 514 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 SFT2D3Q587I9 215 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 WDR44Q5JSH3 913 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 LPCAT4Q643R3 524 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 PPP2R3CQ969Q6 453 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 ZDHHC15Q96MV8 337 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 E7ESA3 106 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 SPECC1L-ADORA2AF8WAN1 911 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 PPEF1O14829 653 aaPredicted RBP17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 CREB3O43889 395 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 SORBS2O94875 1100 aaKnown RBP17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 AQP5P55064 265 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 PDE1BQ01064 536 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 DMP1Q13316 513 aaPredicted RBP17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 GPD1LQ8N335 351 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 ZWILCHQ9H900 591 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 EHMT1Q9H9B1 1298 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 KMT5AQ9NQR1 393 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 FBXO28Q9NVF7 368 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 ETNK2Q9NVF9 386 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 KCNK4Q9NYG8 393 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 TAGLN3Q9UI15 199 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 POLIQ9UNA4 740 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 LTBP1Q14766 1721 aa17.42■□□□□ 0.38
NPC1L1-203ENST00000423141 IQANK1A0A1B0GTG1 560 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 TNNI1P19237 187 aa17.41■□□□□ 0.38
NPC1L1-203ENST00000423141 C1QBPQ07021 282 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms