RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 RGS9BPQ6ZS82 235 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 IGDCC3Q8IVU1 814 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 NIPA2Q8N8Q9 360 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 PTPRN2Q92932 1015 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 XYLT2Q9H1B5 865 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 LRMDAQ9H2I8 198 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 HMGXB4Q9UGU5 601 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 TRIP11Q15643 1979 aa16.57■□□□□ 0.24
CDH1-202ENST00000422392 B4GALT5O43286 388 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 ARL4CP56559 192 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 MMRN1Q13201 1228 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 LY6KQ17RY6 165 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 DPH6Q7L8W6 267 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 MTDHQ86UE4 582 aaKnown RBP16.56■□□□□ 0.24
CDH1-202ENST00000422392 RFX6Q8HWS3 928 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 PALM2Q8IXS6 379 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 RFWD2Q8NHY2 731 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 MIEF2Q96C03 454 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 TBC1D10AQ9BXI6 508 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 CALN1Q9BXU9 219 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 MRPL4Q9BYD3 311 aaKnown RBP16.56■□□□□ 0.24
CDH1-202ENST00000422392 IGKV6D-21A0A0A0MT36 114 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 OGTO15294 1046 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 PRKCBP05771 671 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 CDH5P33151 784 aaPredicted RBP16.56■□□□□ 0.24
CDH1-202ENST00000422392 SLC18A1P54219 525 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 LAMTOR4Q0VGL1 99 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 SH3PXD2AQ5TCZ1 1133 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 NLRP9Q7RTR0 991 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 ZC3H18Q86VM9 953 aaKnown RBP16.56■□□□□ 0.24
CDH1-202ENST00000422392 CCDC125Q86Z20 511 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 ATP11CQ8NB49 1132 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 MZB1Q8WU39 189 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 TRAPPC12Q8WVT3 735 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 R3HDMLQ9H3Y0 253 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 SYNCQ9H7C4 482 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 XPO7Q9UIA9 1087 aaKnown RBP16.56■□□□□ 0.24
CDH1-202ENST00000422392 CPSF3Q9UKF6 684 aaKnown RBP16.56■□□□□ 0.24
CDH1-202ENST00000422392 PCDHGC3Q9UN70 934 aa16.56■□□□□ 0.24
CDH1-202ENST00000422392 MAFO75444 373 aaPredicted RBP16.55■□□□□ 0.24
CDH1-202ENST00000422392 DCTN3O75935 186 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 ERBB2P04626 1255 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 ALDH3A1P30838 453 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 SEPT7Q16181 437 aaKnown RBP16.55■□□□□ 0.24
CDH1-202ENST00000422392 DCAF15Q66K64 600 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 ADGRD1Q6QNK2 874 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 ZPBP2Q6X784 338 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 LONP2Q86WA8 852 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 ZNF276Q8N554 614 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 KCTD6Q8NC69 237 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 FAM13CQ8NE31 585 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 DCAKDQ8WVC6 231 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 RAB3IPQ96QF0 476 aaPredicted RBP16.55■□□□□ 0.24
CDH1-202ENST00000422392 TWNKQ96RR1 684 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 ZNF518BQ9C0D4 1074 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 CYLDQ9NQC7 956 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 NRBP2Q9NSY0 501 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 ZFP69BQ9UJL9 534 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 ZMYND8Q9ULU4 1186 aaPredicted RBP16.55■□□□□ 0.24
CDH1-202ENST00000422392 SUFUQ9UMX1 484 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 SIGLEC16A6NMB1 481 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 ABLIM1O14639 778 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 AVILO75366 819 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 CSDE1O75534 798 aaKnown RBP16.55■□□□□ 0.24
CDH1-202ENST00000422392 SKAP2O75563 359 aaPredicted RBP16.55■□□□□ 0.24
CDH1-202ENST00000422392 ICAM3P32942 547 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 RFC5P40937 340 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 TAP1Q03518 808 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 ANKRD20A2Q5SQ80 823 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 ANKRD20A1Q5TYW2 823 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 ANKRD20A3Q5VUR7 823 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 BBS12Q6ZW61 710 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 POLNQ7Z5Q5 900 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 LRRC6Q86X45 466 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 LRRN4Q8WUT4 740 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 ACSS3Q9H6R3 686 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 KANSL3Q9P2N6 904 aa16.55■□□□□ 0.24
CDH1-202ENST00000422392 A0A0G2JND7 137 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 H0Y3Z8 333 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 CXCL8P10145 99 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 MIPP30301 263 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 PHBP35232 272 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 EIF3EP60228 445 aaKnown RBP16.54■□□□□ 0.24
CDH1-202ENST00000422392 ANGEL2Q5VTE6 544 aaKnown RBP16.54■□□□□ 0.24
CDH1-202ENST00000422392 EEF1DP3Q658K8 133 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 PCGF5Q86SE9 256 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 SDCBP2Q9H190 292 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 POLR2AP24928 1970 aaKnown RBP16.54■□□□□ 0.24
CDH1-202ENST00000422392 MCM3APO60318 1980 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 ZWINTO95229 277 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 MAP3K6O95382 1288 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 RBP3P10745 1247 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 GCLCP48506 637 aaPredicted RBP16.54■□□□□ 0.24
CDH1-202ENST00000422392 TMEM132AQ24JP5 1023 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 XYLT1Q86Y38 959 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 KCNN1Q92952 543 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 PRR11Q96HE9 360 aaPredicted RBP16.54■□□□□ 0.24
CDH1-202ENST00000422392 C12orf42Q96LP6 360 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 NLRP4Q96MN2 994 aa16.54■□□□□ 0.24
CDH1-202ENST00000422392 CAMKK2Q96RR4 588 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms