RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 DARSP14868 501 aaKnown RBP9.26□□□□□ -0.93
SNCA-206ENST00000420646 ATF2P15336 505 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 ADORA2BP29275 332 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 LSP1P33241 339 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 YARSP54577 528 aaKnown RBP9.26□□□□□ -0.93
SNCA-206ENST00000420646 CAP1Q01518 475 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 SLC25A11Q02978 314 aaKnown RBP9.26□□□□□ -0.93
SNCA-206ENST00000420646 MTMR3Q13615 1198 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 BYSLQ13895 437 aaKnown RBP9.26□□□□□ -0.93
SNCA-206ENST00000420646 FASTKD3Q14CZ7 662 aaKnown RBP9.26□□□□□ -0.93
SNCA-206ENST00000420646 SNX17Q15036 470 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 PWP2Q15269 919 aaKnown RBP9.26□□□□□ -0.93
SNCA-206ENST00000420646 GOLGA7BQ2TAP0 167 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 CYP4F22Q6NT55 531 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 SCYL2Q6P3W7 929 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 SLC27A1Q6PCB7 646 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 NPNTQ6UXI9 565 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 FAM183BPQ6ZVS7 135 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 RASAL3Q86YV0 1011 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 MLXIPLQ9NP71 852 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 NEU2Q9Y3R4 380 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 NRCAMQ92823 1304 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 C3orf70A6NLC5 250 aaPredicted RBP9.26□□□□□ -0.93
SNCA-206ENST00000420646 HMGB1P1B2RPK0 211 aaPredicted RBP9.26□□□□□ -0.93
SNCA-206ENST00000420646 LIASO43766 372 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 GAS8O95995 478 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 HOXD8P13378 290 aaPredicted RBP9.26□□□□□ -0.93
SNCA-206ENST00000420646 GRM5P41594 1212 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 CRHR2Q13324 411 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 CLUL1Q15846 466 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 CCNG2Q16589 344 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 SOWAHAQ2M3V2 549 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 IZUMO3Q5VZ72 239 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 LRIG3Q6UXM1 1119 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 KDM7AQ6ZMT4 941 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 RCOR2Q8IZ40 523 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 SNF8Q96H20 258 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 NT5C1AQ9BXI3 368 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 ZNF518BQ9C0D4 1074 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 hCG_1818297A0A087WSY0 165 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 SMIM28A0A1B0GU29 152 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 SGK1O00141 431 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 TNPO2O14787 897 aaKnown RBP9.25□□□□□ -0.93
SNCA-206ENST00000420646 MED7O43513 233 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 PDGFRAP16234 1089 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 PECAM1P16284 738 aaPredicted RBP9.25□□□□□ -0.93
SNCA-206ENST00000420646 ACAT1P24752 427 aaKnown RBP9.25□□□□□ -0.93
SNCA-206ENST00000420646 PSEN2P49810 448 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 ARSEP51690 589 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 GPS1Q13098 491 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 PIGHQ14442 188 aaPredicted RBP9.25□□□□□ -0.93
SNCA-206ENST00000420646 CNGA2Q16280 664 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 TFDP3Q5H9I0 405 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 GNASQ5JWF2 1037 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 KCTD6Q8NC69 237 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 TRPV1Q8NER1 839 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 ACTL9Q8TC94 416 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 SNX27Q96L92 541 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 LHX5Q9H2C1 402 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 ADAM7Q9H2U9 754 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 ITGA11Q9UKX5 1188 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 C2CD2Q9Y426 696 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 CITO14578 2027 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 COL1A2P08123 1366 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 A8MXQ7 604 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 TRIM66O15016 1216 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 PAEPP09466 180 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 RARGP13631 454 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 MDH1P40925 334 aaKnown RBP9.25□□□□□ -0.93
SNCA-206ENST00000420646 FKBP1BP68106 108 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 SKOR1P84550 965 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 OTUD4Q01804 1114 aaKnown RBP9.25□□□□□ -0.93
SNCA-206ENST00000420646 ZC3H12AQ5D1E8 599 aaKnown RBP9.25□□□□□ -0.93
SNCA-206ENST00000420646 NOTUMQ6P988 496 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 RHBDF2Q6PJF5 856 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 SAPCD2Q86UD0 394 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 ZNF410Q86VK4 478 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 ZC3H18Q86VM9 953 aaKnown RBP9.25□□□□□ -0.93
SNCA-206ENST00000420646 RXFP2Q8WXD0 754 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 LPPQ93052 612 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 SELENOSQ9BQE4 189 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 NGRNQ9NPE2 291 aaKnown RBP9.25□□□□□ -0.93
SNCA-206ENST00000420646 TIMM13Q9Y5L4 95 aaPredicted RBP9.25□□□□□ -0.93
SNCA-206ENST00000420646 NR2E3Q9Y5X4 410 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.25□□□□□ -0.93
SNCA-206ENST00000420646 E7EVH7 732 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 NDUFAB1O14561 156 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 TJP3O95049 919 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 VDRP11473 427 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 KLRC2P26717 231 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 PTK6Q13882 451 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 FSCN1Q16658 493 aaKnown RBP9.25□□□□□ -0.93
SNCA-206ENST00000420646 FAM47CQ5HY64 1035 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 C9orf57Q5W0N0 161 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 TWF2Q6IBS0 349 aaKnown RBP9.25□□□□□ -0.93
SNCA-206ENST00000420646 C17orf99Q6UX52 265 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 CTU1Q7Z7A3 348 aaKnown RBP9.25□□□□□ -0.93
SNCA-206ENST00000420646 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.25□□□□□ -0.93
SNCA-206ENST00000420646 SLC12A6Q9UHW9 1150 aa9.25□□□□□ -0.93
SNCA-206ENST00000420646 USP18Q9UMW8 372 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms