RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 SGO2Q562F6 1265 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 LPCAT4Q643R3 524 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 ZNF746Q6NUN9 644 aaPredicted RBP6.4□□□□□ -1.39
CHD2-202ENST00000420239 INTS5Q6P9B9 1019 aaKnown RBP6.4□□□□□ -1.39
CHD2-202ENST00000420239 ISLR2Q6UXK2 745 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 PTF1AQ7RTS3 328 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 ANKS1BQ7Z6G8 1248 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 ARPINQ7Z6K5 226 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 NLRX1Q86UT6 975 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 ALYREFQ86V81 257 aaKnown RBP6.4□□□□□ -1.39
CHD2-202ENST00000420239 RASSF3Q86WH2 238 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 NT5DC4Q86YG4 428 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 ULK2Q8IYT8 1036 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 ZBED8Q8IZ13 594 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 RBM15BQ8NDT2 890 aaKnown RBP6.4□□□□□ -1.39
CHD2-202ENST00000420239 LMO3Q8TAP4 145 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 FNDC8Q8TC99 324 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 GRK7Q8WTQ7 553 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 RSPH1Q8WYR4 309 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 TTC25Q96NG3 672 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 OSBPL8Q9BZF1 889 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 NMUR2Q9GZQ4 415 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 INTS2Q9H0H0 1204 aaKnown RBP6.4□□□□□ -1.39
CHD2-202ENST00000420239 PFDN4Q9NQP4 134 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.4□□□□□ -1.392e-6■■■■■ 55.9
CHD2-202ENST00000420239 FAIMQ9NVQ4 179 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 NDUFA13Q9P0J0 144 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 SPATA7Q9P0W8 599 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 SLC7A8Q9UHI5 535 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 STX8Q9UNK0 236 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 TMEM98Q9Y2Y6 226 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 SBF2Q86WG5 1849 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 PNMA6FA0A0J9YX94 578 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 WTIPA6NIX2 430 aaPredicted RBP6.39□□□□□ -1.39
CHD2-202ENST00000420239 POC1B-GALNT4F8VUJ3 575 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 H3BRJ5 948 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 TBX3O15119 743 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 E2F6O75461 281 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 TM7SF2O76062 418 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 STK10O94804 968 aaKnown RBP6.39□□□□□ -1.39
CHD2-202ENST00000420239 IL2RAP01589 272 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 FTLP02792 175 aaPredicted RBP6.39□□□□□ -1.39
CHD2-202ENST00000420239 COL6A2P12110 1019 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 IDO1P14902 403 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 VCLP18206 1134 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 RPA1P27694 616 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 PEX2P28328 305 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 SLC5A2P31639 672 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 HIBADHP31937 336 aaKnown RBP6.39□□□□□ -1.39
CHD2-202ENST00000420239 MAGEA4P43358 317 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 CDK8P49336 464 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 ARFIP2P53365 341 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 MED21Q13503 144 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 MYBPC2Q14324 1141 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 FASTKD3Q14CZ7 662 aaKnown RBP6.39□□□□□ -1.39
CHD2-202ENST00000420239 DLGAP5Q15398 846 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 LRRC36Q1X8D7 754 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 ANKRD20A4Q4UJ75 823 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 SLC44A4Q53GD3 710 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 MDH1BQ5I0G3 518 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 SLC10A5Q5PT55 438 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 MEX3CQ5U5Q3 659 aaKnown RBP6.39□□□□□ -1.39
CHD2-202ENST00000420239 IZUMO3Q5VZ72 239 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 CCDC62Q6P9F0 684 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 TRIM67Q6ZTA4 783 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 ADGRG6Q86SQ4 1221 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 DHDDSQ86SQ9 333 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 NOP9Q86U38 636 aaKnown RBP6.39□□□□□ -1.39
CHD2-202ENST00000420239 FAM186BQ8IYM0 893 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 SLFN12Q8IYM2 578 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 CCDC116Q8IYX3 515 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 NUP93Q8N1F7 819 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 CEP70Q8NHQ1 597 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 CCDC110Q8TBZ0 833 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 TMEM174Q8WUU8 243 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 DDX17Q92841 729 aaKnown RBP6.39□□□□□ -1.39
CHD2-202ENST00000420239 COA7Q96BR5 231 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 ALKBH8Q96BT7 664 aaKnown RBP6.39□□□□□ -1.39
CHD2-202ENST00000420239 MYO19Q96H55 970 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 EYA3Q99504 573 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 REEP2Q9BRK0 252 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 DCLK3Q9C098 648 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 BRD8Q9H0E9 1235 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 GLT8D2Q9H1C3 349 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 ZHX3Q9H4I2 956 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 S100A14Q9HCY8 104 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 TIMMDC1Q9NPL8 285 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 TBCCD1Q9NVR7 557 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 BTBD7Q9P203 1132 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 SLC17A7Q9P2U7 560 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 ADAMTS6Q9UKP5 1117 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 EFR3BQ9Y2G0 817 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 TELO2Q9Y4R8 837 aa6.39□□□□□ -1.39
CHD2-202ENST00000420239 ZNFX1Q9P2E3 1918 aaKnown RBP6.39□□□□□ -1.39
CHD2-202ENST00000420239 GREB1LQ9C091 1923 aaPredicted RBP6.38□□□□□ -1.39
CHD2-202ENST00000420239 CAPN14A8MX76 684 aa6.38□□□□□ -1.39
CHD2-202ENST00000420239 B2RBV5 119 aa6.38□□□□□ -1.39
CHD2-202ENST00000420239 E5RJQ4 531 aa6.38□□□□□ -1.39
CHD2-202ENST00000420239 CLIC2O15247 247 aa6.38□□□□□ -1.39
CHD2-202ENST00000420239 PMM2O15305 246 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms