RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 SH2D4BQ5SQS7 431 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 SEL1L2Q5TEA6 688 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 FAXCQ5TGI0 409 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 MIER3Q7Z3K6 550 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 RTKN2Q8IZC4 609 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 SCML4Q8N228 414 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 ARNTL2Q8WYA1 636 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 ATG4AQ8WYN0 398 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 LRRC39Q96DD0 335 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 RBM41Q96IZ5 413 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 CNDP1Q96KN2 507 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 SIGLEC10Q96LC7 697 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 PWWP2AQ96N64 755 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 NT5C1BQ96P26 610 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 FRMD8Q9BZ67 464 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 GPAMQ9HCL2 828 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 PPANQ9NQ55 473 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 USH1CQ9Y6N9 552 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 ATG2AQ2TAZ0 1938 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 TCP11X1B4DZS4 312 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 IGF2BP3O00425 579 aaKnown RBP eCLIP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 SLC16A4O15374 487 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 BIRC5O15392 142 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 RGS16O15492 202 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 THAP12O43422 761 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 GCATO75600 419 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 CYP2J2P51589 502 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 GTF2A1P52655 376 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 BACE1P56817 501 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 FSTL1Q12841 308 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 XKR3Q5GH77 459 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 ANKRD20A2Q5SQ80 823 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 FAM182BQ5T319 152 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 TMCO4Q5TGY1 634 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 ANKRD20A1Q5TYW2 823 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 ANKRD20A3Q5VUR7 823 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 MARK2Q7KZI7 788 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 TMEM110Q86TL2 294 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 ZNF75CPQ92670 426 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 FATE1Q969F0 183 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 ZNF653Q96CK0 615 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 MAELQ96JY0 434 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 TANGO6Q9C0B7 1094 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 TMEM39BQ9GZU3 492 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 ECT2Q9H8V3 914 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 STX18Q9P2W9 335 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 MTRF1LQ9UGC7 380 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 TRIP12Q14669 1992 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 VGLL3A8MV65 326 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 TRDMT1O14717 391 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 SPAG6O75602 509 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 ANP32DO95626 131 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 LDHAP00338 332 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 OATP04181 439 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 SBK3P0C264 359 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 FAM163BP0C2L3 166 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 KDELR1P24390 212 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 PTPN4P29074 926 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 HARS2P49590 506 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 TUBP50607 506 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 PRKCEQ02156 737 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 STRN3Q13033 797 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 SEMA5AQ13591 1074 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 DPYSL3Q14195 570 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 SLC14A2Q15849 920 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 DPYSL2Q16555 572 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 P3H1Q32P28 736 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 CDHR3Q6ZTQ4 885 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 PCGF5Q86SE9 256 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 KIAA0825Q8IV33 1275 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 SPICE1Q8N0Z3 855 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 ZNF483Q8TF39 744 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 SPOCK2Q92563 424 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 SERAC1Q96JX3 654 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 CYP2S1Q96SQ9 504 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 UHRF1Q96T88 793 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 DENND2DQ9H6A0 471 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 OSER1Q9NX31 292 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 PHTF1Q9UMS5 762 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 SORCS3Q9UPU3 1222 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 IVNS1ABPQ9Y6Y0 642 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 HTTP42858 3142 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 ARHGEF35A5YM69 484 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 BTBD19C9JJ37 291 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 PEX1O43933 1283 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 TRUB2O95900 331 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 MLNP12872 115 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 GEMIN4P57678 1058 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 ACTR2P61160 394 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 COL4A3Q01955 1670 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 MAP2K1Q02750 393 aaPredicted RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 EMC2Q15006 297 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 PKN2Q16513 984 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 KYNUQ16719 465 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 PABPC1LQ4VXU2 614 aaKnown RBP4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 SGO2Q562F6 1265 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 CCDC121Q6ZUS5 278 aa4.69□□□□□ -1.66
GPCPD1-202ENST00000418646 RIOX2Q8IUF8 465 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms