RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PLCB3Q01970 1234 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 USP17L24Q0WX57 530 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 APOFQ13790 326 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 KRT81Q14533 505 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 GRAMD1BQ3KR37 738 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 DRICH1Q6PGQ1 229 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 USP17L6PQ6QN14 398 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 STXBP4Q6ZWJ1 553 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 ANO5Q75V66 913 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 KATNAL2Q8IYT4 538 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 ALLCQ8N6M5 410 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 MRPL1Q9BYD6 325 aaKnown RBP8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 Q9H521 79 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 PFDN4Q9NQP4 134 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 AVENQ9NQS1 362 aaPredicted RBP8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 SEL1LQ9UBV2 794 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 DNPEPQ9ULA0 475 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 MAD1L1Q9Y6D9 718 aa8.39□□□□□ -1.07
HMGXB4-202ENST00000418170 TRIM43BA6NCK2 446 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 CAPN8A6NHC0 703 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 MEI4A8MW99 385 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 ONECUT3O60422 494 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 DNAJA2O60884 412 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 BANF1O75531 89 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 PIAS1O75925 651 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 MT-ND3P03897 115 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 SERPINA6P08185 405 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 ADRA2BP18089 450 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 ACADVLP49748 655 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 CREB5Q02930 508 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 SLC18A2Q05940 514 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 MYBPC2Q14324 1141 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 HIF1AQ16665 826 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 PRR16Q569H4 304 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 PGM2L1Q6PCE3 622 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 PATL1Q86TB9 770 aaKnown RBP8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 DDI1Q8WTU0 396 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 DDX1Q92499 740 aaKnown RBP8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 ZNHIT2Q9UHR6 403 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 DTNAQ9Y4J8 743 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 AK5Q9Y6K8 562 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 LDHBP07195 334 aaKnown RBP8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 GYS1P13807 737 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 ETS1P14921 441 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 ATP6V1B1P15313 513 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 RAG1P15918 1043 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 GCLMP48507 274 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 VAMP7P51809 220 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 BTKQ06187 659 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 ZNF543Q08ER8 600 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 CIAPIN1Q6FI81 312 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 C3orf62Q6ZUJ4 267 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 SH2D5Q6ZV89 423 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 C1orf186Q6ZWK4 172 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 SLC51AQ86UW1 340 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 ARID3BQ8IVW6 561 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 RHOT1Q8IXI2 618 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 FAM178BQ8IXR5 827 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 SLC15A3Q8IY34 581 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 LRRC47Q8N1G4 583 aaKnown RBP8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 OGFOD1Q8N543 542 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 KCTD17Q8N5Z5 321 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 EXD1Q8NHP7 514 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 RIN3Q8TB24 985 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 PLEKHO2Q8TD55 490 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 PYROXD1Q8WU10 500 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 CRYGNQ8WXF5 182 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 TEKT1Q969V4 418 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 CCDC97Q96F63 343 aaPredicted RBP8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 TMEM117Q9H0C3 514 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 GLT8D2Q9H1C3 349 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 SPATA7Q9P0W8 599 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 SORCS3Q9UPU3 1222 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 INPP5FQ9Y2H2 1132 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 I3L4J1 428 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 ZBTB5O15062 677 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 CBFA2T3O75081 653 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 PROSCO94903 275 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 HOXD12P35452 270 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 ALDH18A1P54886 795 aaKnown RBP8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 NR1H2P55055 460 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 SLC25A3Q00325 362 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 MYBPC1Q00872 1141 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 SPIDRQ14159 915 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 KBTBD12Q3ZCT8 623 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 C1orf220Q5T0J3 134 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 GRAMD4Q6IC98 578 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 DHRS4L2Q6PKH6 230 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 C3orf67Q6ZVT6 689 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 ERI1Q8IV48 349 aaKnown RBP8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 SLF2Q8IX21 1173 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 LENG9Q96B70 501 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 ABHD8Q96I13 439 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 PHF12Q96QT6 1004 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 SMYD3Q9H7B4 428 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 MTMR4Q9NYA4 1195 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 RAB26Q9ULW5 256 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 PCDHGB4Q9UN71 923 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 PCDHGB5Q9Y5G0 923 aa8.38□□□□□ -1.07
HMGXB4-202ENST00000418170 CEPT1Q9Y6K0 416 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms