RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 KIF18AQ8NI77 898 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 CHURC1Q8WUH1 139 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 BTN2A2Q8WVV5 523 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 ADAMTS14Q8WXS8 1223 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 TNPO1Q92973 898 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 WBP1Q96G27 269 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 ZC3H10Q96K80 434 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 AGAP3Q96P47 875 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 LZTS2Q9BRK4 669 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 RIOK1Q9BRS2 568 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 PHF20Q9BVI0 1012 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 KCNF1Q9H3M0 494 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 LMAN1LQ9HAT1 526 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 DCP1AQ9NPI6 582 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 MAN1C1Q9NR34 630 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 SETD4Q9NVD3 440 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 GFOD1Q9NXC2 390 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 STK17AQ9UEE5 414 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 TPX2Q9ULW0 747 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 CDY2AQ9Y6F7 541 aa6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 UBR5O95071 2799 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-206ENST00000417628 MYH15Q9Y2K3 1946 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 A0A1B0GTL3 188 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 NOP56O00567 594 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 DLX3O60479 287 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 RPS6KA5O75582 802 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 KCNH1O95259 989 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 BAG4O95429 457 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 ICAM1P05362 532 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 IVLP07476 585 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 FAM87AP0C7U9 286 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 KLRC2P26717 231 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 ADMP35318 185 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 POLGP54098 1239 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 SNAP25P60880 206 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 CYP4F3Q08477 520 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 PDIA5Q14554 519 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 PPP2R5AQ15172 486 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 ELF2Q15723 593 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 FNDC3BQ53EP0 1204 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 TTC39AQ5SRH9 613 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 GTF2IRD2BQ6EKJ0 949 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 RNF207Q6ZRF8 634 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 GTF2IRD2Q86UP8 949 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 AMOTL1Q8IY63 956 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 SHISA5Q8N114 240 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 SDR42E1Q8WUS8 393 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 LMBR1Q8WVP7 490 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 MFSD3Q96ES6 412 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 TMEM169Q96HH4 297 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 HEXIM2Q96MH2 286 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 SPATA33Q96N06 139 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 TBC1D32Q96NH3 1257 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 FAM83CQ9BQN1 747 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 FAM107BQ9H098 131 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 ADAMTS10Q9H324 1103 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 NOL6Q9H6R4 1146 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 C1orf112Q9NSG2 853 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 PRR13Q9NZ81 148 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 CLIP2Q9UDT6 1046 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 SUN2Q9UH99 717 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 DPP7Q9UHL4 492 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 SQORQ9Y6N5 450 aa6.06□□□□□ -1.44
ECHDC1-206ENST00000417628 GREB1LQ9C091 1923 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 CCDC171Q6TFL3 1326 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 FNDC1Q4ZHG4 1894 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 A0A087X0B3 334 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 DHX15O43143 795 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 ATP8B1O43520 1251 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 RHOBTB1O94844 696 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 LGALS2P05162 132 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 TPM1P09493 284 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 FAM200BP0CF97 657 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 CR2P20023 1033 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 ELAVL4P26378 380 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 ADSSP30520 456 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 PRPHP41219 470 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 CHRNA4P43681 627 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 PSMC1P62191 440 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 SUMO1P63165 101 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 TPM4P67936 248 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 CCT2P78371 535 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 ADAM17P78536 824 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 LMAN2Q12907 356 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 HNRNPDQ14103 355 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 HSDL1Q3SXM5 330 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 PLK5Q496M5 336 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 SLFN13Q68D06 897 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 KRBA2Q6ZNG9 492 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 LRRC55Q6ZSA7 311 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 GAS2L3Q86XJ1 694 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 THNSL2Q86YJ6 484 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 DRAXINQ8NBI3 349 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 CCDC26Q8TAB7 109 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 GOLGA5Q8TBA6 731 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 FAM3CQ92520 227 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 DNASE1L2Q92874 299 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 RMDN2Q96LZ7 410 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 SLX1AQ9BQ83 275 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms