RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 HMGXB4Q9UGU5 601 aa11.76□□□□□ -0.53
TM9SF4-203ENST00000417389 CA14Q9ULX7 337 aa11.76□□□□□ -0.53
TM9SF4-203ENST00000417389 DUSP12Q9UNI6 340 aa11.76□□□□□ -0.53
TM9SF4-203ENST00000417389 NME7Q9Y5B8 376 aa11.76□□□□□ -0.53
TM9SF4-203ENST00000417389 DOCK6Q96HP0 2047 aa11.76□□□□□ -0.53
TM9SF4-203ENST00000417389 PES1O00541 588 aaKnown RBP11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 AP1G2O75843 785 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 AFPP02771 609 aaKnown RBP11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 SRFP11831 508 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 AVPR1AP37288 418 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 VIPR2P41587 438 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 YWHAEP62258 255 aaKnown RBP11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 GPC5P78333 572 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 FOXR2Q6PJQ5 311 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 DENND5BQ6ZUT9 1274 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 HFE2Q6ZVN8 426 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 GAREM2Q75VX8 874 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 FAM35AQ86V20 835 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 FAM114A1Q8IWE2 563 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 SIX5Q8N196 739 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 TTC39CQ8N584 583 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 MAB21L3Q8N8X9 362 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 C12orf29Q8N999 325 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 SLC2A14Q8TDB8 520 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 TATDN2Q93075 761 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 SMARCD1Q96GM5 515 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 CNOT6LQ96LI5 555 aaKnown RBP11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 HEXIM2Q96MH2 286 aaKnown RBP11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 NT5C1BQ96P26 610 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 LRRC3Q9BY71 257 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 BCO2Q9BYV7 579 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 TASP1Q9H6P5 420 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 BRD9Q9H8M2 597 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 CISHQ9NSE2 258 aa11.75□□□□□ -0.53
TM9SF4-203ENST00000417389 NRG2O14511 850 aaPredicted RBP11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 MOSPD3O75425 235 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 ECI2O75521 394 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 NOL4O94818 638 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 FAM200BP0CF97 657 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 HMGA1P17096 107 aaKnown RBP11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 MAP3K7CLP57077 242 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 KCNH2Q12809 1159 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 CUL2Q13617 745 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 HSP90AA4PQ58FG1 418 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 ARID3BQ8IVW6 561 aaPredicted RBP11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 PPM1KQ8N3J5 372 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 ELSPBP1Q96BH3 223 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 CYFIP2Q96F07 1278 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 SPATA17Q96L03 361 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 C8orf48Q96LL4 319 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 ASB16Q96NS5 453 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 ARID3AQ99856 593 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 TRMT61BQ9BVS5 477 aaKnown RBP11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 DMAP1Q9NPF5 467 aaPredicted RBP11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 C11orf16Q9NQ32 467 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 TRPM5Q9NZQ8 1165 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 HCN4Q9Y3Q4 1203 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 MYO10Q9HD67 2058 aa11.74□□□□□ -0.53
TM9SF4-203ENST00000417389 HEPACAM2A8MVW5 462 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 ZNF263O14978 683 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 CILPO75339 1184 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 PDGFBP01127 241 aaPredicted RBP11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 CKMP06732 381 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 PRKCSHP14314 528 aaPredicted RBP11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 CD19P15391 556 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 TBXAS1P24557 533 aaPredicted RBP11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 DDX6P26196 483 aaKnown RBP eCLIP11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 GDI1P31150 447 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 CACNA2D1P54289 1103 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 PFKPQ01813 784 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 INCA1Q0VD86 236 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 CCDC183Q5T5S1 534 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 TXNDC8Q6A555 127 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 TRIM59Q8IWR1 403 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 CRYBG2Q8N1P7 616 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 FBXL6Q8N531 539 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 E2F7Q96AV8 911 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 TRMT2BQ96GJ1 504 aaKnown RBP11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 SLITRK1Q96PX8 696 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 TWNKQ96RR1 684 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 KCNK16Q96T55 309 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 PLA2G2FQ9BZM2 168 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 SMG9Q9H0W8 520 aaKnown RBP11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 IL21Q9HBE4 155 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 PCDHB4Q9Y5E5 795 aa11.73□□□□□ -0.53
TM9SF4-203ENST00000417389 DOCK8Q8NF50 2099 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 TRAV19A0A0A6YYK7 116 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 P4HA2O15460 535 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 RTN3O95197 1032 aaPredicted RBP11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 F11P03951 625 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 PSMC3P17980 439 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 YWHAQP27348 245 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 ERCC5P28715 1186 aaPredicted RBP11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 SLC8A3P57103 927 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 USP46P62068 366 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 CC2D1AQ6P1N0 951 aaPredicted RBP11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 VITQ6UXI7 678 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 RRAGAQ7L523 313 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 CMTM8Q8IZV2 173 aa11.72□□□□□ -0.53
TM9SF4-203ENST00000417389 FUKQ8N0W3 1084 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms