RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 NOCTQ9UK39 431 aaKnown RBP15.39■□□□□ 0.05
NCKIPSD-204ENST00000416649 NRXN2Q9P2S2 1712 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 CAPN8A6NHC0 703 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 PRR5-ARHGAP8B1AHC4 643 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 F5H6K3 240 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 DNALI1O14645 258 aaPredicted RBP15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 FDX1P10109 184 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 PCSK6P29122 969 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 CLK2P49760 499 aaKnown RBP15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 ARHGAP8P85298 464 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 FOLH1Q04609 750 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 UBAP2LQ14157 1087 aaKnown RBP15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 CCNG2Q16589 344 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 PRAMEF18Q5VWM3 479 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 CC2D2BQ6DHV5 1058 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 RSBN1LQ6PCB5 846 aaPredicted RBP15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 C3orf62Q6ZUJ4 267 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 ANKS1BQ7Z6G8 1248 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 SIAH1Q8IUQ4 282 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 ICA1LQ8NDH6 482 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 DHX38Q92620 1227 aaKnown RBP15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 ACAP3Q96P50 834 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 IQCGQ9H095 443 aaKnown RBP15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 GINM1Q9NU53 330 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 FAF1Q9UNN5 650 aaPredicted RBP15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 DDX39AO00148 427 aaKnown RBP15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 FKBP6O75344 327 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 TRPA1O75762 1119 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 CENPCQ03188 943 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 DGKZQ13574 1117 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 ASPRV1Q53RT3 343 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 RNF111Q6ZNA4 994 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 CPA5Q8WXQ8 436 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 NDUFA13Q9P0J0 144 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 TAGLN3Q9UI15 199 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 LZTS1Q9Y250 596 aa15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 HEMK1Q9Y5R4 338 aaPredicted RBP15.38■□□□□ 0.05
NCKIPSD-204ENST00000416649 IGKV6D-41A0A0C4DH26 115 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 CYP11B1P15538 503 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 KLRC2P26717 231 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 SMARCA1P28370 1054 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 PMLP29590 882 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 SLC1A1P43005 524 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 RPL5P46777 297 aaKnown RBP15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 CXCL9Q07325 125 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 DNAL1Q4LDG9 190 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 ANKRD20A4Q4UJ75 823 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 EFHC1Q5JVL4 640 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 TSHZ1Q6ZSZ6 1077 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 NLRX1Q86UT6 975 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 NIM1KQ8IY84 436 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 ZFP28Q8NHY6 868 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 TSPYL2Q9H2G4 693 aaPredicted RBP15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 SLC24A2Q9UI40 661 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 PCDHA1Q9Y5I3 950 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 CENPFP49454 3210 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 SPDYE2BA6NHP3 402 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 SPDYE6P0CI01 402 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 ZNF76P36508 570 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 VAMP7P51809 220 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 GPX6P59796 221 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 TMPRSS15P98073 1019 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 ARHGAP4P98171 946 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 SPIRE1Q08AE8 756 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 QRICH1Q2TAL8 776 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 ATP13A4Q4VNC1 1196 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 RALGPS1Q5JS13 557 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 RELL1Q8IUW5 271 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 GAB3Q8WWW8 586 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 PRICKLE1Q96MT3 831 aaPredicted RBP15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 P2RX7Q99572 595 aaKnown RBP15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 NAP1L4Q99733 375 aaKnown RBP15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 EIF2AK1Q9BQI3 630 aaKnown RBP15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 MRPL1Q9BYD6 325 aaKnown RBP15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 GLIS2Q9BZE0 524 aaPredicted RBP15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 OLFML3Q9NRN5 406 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 PCDHGB4Q9UN71 923 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 PCDHGB5Q9Y5G0 923 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 ASTN2O75129 1339 aaPredicted RBP15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 GOLGA8IPA6NC78 632 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 GOLGA8JA6NMD2 632 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 I3L4J1 428 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 SGK1O00141 431 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 EML1O00423 815 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 TM9SF1O15321 606 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 TFAP2AP05549 437 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 GTF2H1P32780 548 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 SERPINB8P50452 374 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 AQP5P55064 265 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 ITGA9Q13797 1035 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 PRKD1Q15139 912 aaPredicted RBP15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 TMCO4Q5TGY1 634 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 RHPN2Q8IUC4 686 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 BANPQ8N9N5 519 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 ZSWIM2Q8NEG5 633 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 CCDC127Q96BQ5 260 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 CNBD2Q96M20 576 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 KREMEN1Q96MU8 473 aa15.37■□□□□ 0.05
NCKIPSD-204ENST00000416649 C10orf88Q9H8K7 445 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms