RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 DPP3Q9NY33 737 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 EVLQ9UI08 416 aaPredicted RBP10.08□□□□□ -0.8
LINC01238-201ENST00000416204 CPSF3Q9UKF6 684 aaKnown RBP10.08□□□□□ -0.8
LINC01238-201ENST00000416204 DSEQ9UL01 958 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 RAXQ9Y2V3 346 aa10.08□□□□□ -0.8
LINC01238-201ENST00000416204 FLNBO75369 2602 aaKnown RBP10.08□□□□□ -0.8
LINC01238-201ENST00000416204 ZNF638Q14966 1978 aaKnown RBP10.07□□□□□ -0.8
LINC01238-201ENST00000416204 A0A0B4J269 797 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 ANKRD63C9JTQ0 380 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 TNFRSF10BO14763 440 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 SH3BP5O60239 455 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 CAPNS1P04632 268 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 PLA2G4BP0C869 781 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 CSH1P0DML2 217 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 CSH2P0DML3 217 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 WASP42768 502 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 TOB1P50616 345 aaPredicted RBP10.07□□□□□ -0.8
LINC01238-201ENST00000416204 NCKAP1LP55160 1127 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 TSPY1Q01534 308 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 NR1H3Q13133 447 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 PDIA5Q14554 519 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 ZNF268Q14587 947 aaPredicted RBP10.07□□□□□ -0.8
LINC01238-201ENST00000416204 KCNB1Q14721 858 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 MAP7D1Q3KQU3 841 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 ARSHQ5FYA8 562 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 FILIP1Q7Z7B0 1213 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 C11orf74Q86VG3 221 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 CCDC83Q8IWF9 413 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 MINDY1Q8N5J2 469 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 IL17RCQ8NAC3 791 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 WHAMMQ8TF30 809 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 C2orf15Q8WU43 125 aaKnown RBP10.07□□□□□ -0.8
LINC01238-201ENST00000416204 CRELD1Q96HD1 420 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 SPACA7Q96KW9 195 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 ZHX3Q9H4I2 956 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 PILRBQ9UKJ0 227 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 GTF3C4Q9UKN8 822 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 NOL7Q9UMY1 257 aaKnown RBP10.07□□□□□ -0.8
LINC01238-201ENST00000416204 GON4LQ3T8J9 2241 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 ADAMTS20P59510 1910 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 ADAMTS9Q9P2N4 1935 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 KIAA1549LQ6ZVL6 1849 aa10.07□□□□□ -0.8
LINC01238-201ENST00000416204 SCN1AP35498 2009 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 KPNA7A9QM74 516 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 LEFTY2O00292 366 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 OPHN1O60890 802 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 ADAM23O75077 832 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 ALDH1A2O94788 518 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 NOL4O94818 638 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 NFATC1O95644 943 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 CYP17A1P05093 508 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 CD59P13987 128 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 HDCP19113 662 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 NEK4P51957 841 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 SLC12A3P55017 1021 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 WNT7BP56706 349 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 RPL6Q02878 288 aaKnown RBP10.06□□□□□ -0.8
LINC01238-201ENST00000416204 GFPT1Q06210 699 aaPredicted RBP10.06□□□□□ -0.8
LINC01238-201ENST00000416204 SLC23A3Q6PIS1 610 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 RAB44Q7Z6P3 723 aaPredicted RBP10.06□□□□□ -0.8
LINC01238-201ENST00000416204 OSTM1Q86WC4 334 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 PDCL2Q8N4E4 241 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 MYCT1Q8N699 235 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 REEP2Q9BRK0 252 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 RAB34Q9BZG1 259 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 FOXP1Q9H334 677 aaPredicted RBP10.06□□□□□ -0.8
LINC01238-201ENST00000416204 GCNT4Q9P109 453 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 DAXXQ9UER7 740 aaPredicted RBP10.06□□□□□ -0.8
LINC01238-201ENST00000416204 ZMYM5Q9UJ78 669 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 L1RE1Q9UN81 338 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 OBSL1O75147 1896 aa10.06□□□□□ -0.8
LINC01238-201ENST00000416204 ASH1LQ9NR48 2969 aaKnown RBP10.05□□□□□ -0.8
LINC01238-201ENST00000416204 ATP2C2O75185 946 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 ABL1P00519 1130 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 PRB1P04280 392 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 ADRB2P07550 413 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 CHRM1P11229 460 aaPredicted RBP10.05□□□□□ -0.8
LINC01238-201ENST00000416204 POLR2BP30876 1174 aaKnown RBP10.05□□□□□ -0.8
LINC01238-201ENST00000416204 USP46P62068 366 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 PSMC1P62191 440 aaKnown RBP10.05□□□□□ -0.8
LINC01238-201ENST00000416204 ATP2C1P98194 919 aaPredicted RBP10.05□□□□□ -0.8
LINC01238-201ENST00000416204 TFAMQ00059 246 aaKnown RBP10.05□□□□□ -0.8
LINC01238-201ENST00000416204 ORC2Q13416 577 aaPredicted RBP10.05□□□□□ -0.8
LINC01238-201ENST00000416204 TRIP6Q15654 476 aaKnown RBP10.05□□□□□ -0.8
LINC01238-201ENST00000416204 SV2CQ496J9 727 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 ADALQ6DHV7 355 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 DTHD1Q6ZMT9 781 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 GPBP1Q86WP2 473 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 NAT16Q8N8M0 369 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 SYT2Q8N9I0 419 aaPredicted RBP10.05□□□□□ -0.8
LINC01238-201ENST00000416204 ZSWIM2Q8NEG5 633 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 TIPINQ9BVW5 301 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 CCDC86Q9H6F5 360 aaKnown RBP10.05□□□□□ -0.8
LINC01238-201ENST00000416204 TMEM206Q9H813 350 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 CD93Q9NPY3 652 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 DDX43Q9NXZ2 648 aaKnown RBP10.05□□□□□ -0.8
LINC01238-201ENST00000416204 SLC6A14Q9UN76 642 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 KALRNO60229 2985 aa10.05□□□□□ -0.8
LINC01238-201ENST00000416204 VWA3AA6NCI4 1184 aa10.04□□□□□ -0.8
LINC01238-201ENST00000416204 MYMKA6NI61 221 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms