RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ITIH2P19823 946 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 CTNNB1P35222 781 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 PBX3P40426 434 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 UBA7P41226 1012 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 PTENP60484 403 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 AMPD2Q01433 879 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 MBTD1Q05BQ5 628 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 CDK5R2Q13319 367 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 TFDP1Q14186 410 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 DPY19L1Q2PZI1 675 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 TMEM119Q4V9L6 283 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 EPC2Q52LR7 807 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 SGO2Q562F6 1265 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 SLC35F1Q5T1Q4 408 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 SPOUT1Q5T280 376 aaKnown RBP5.36□□□□□ -1.55
VPS41-205ENST00000414632 ARL6IP4Q66PJ3 421 aaKnown RBP5.36□□□□□ -1.55
VPS41-205ENST00000414632 DENND5AQ6IQ26 1287 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 RINT1Q6NUQ1 792 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 PKN3Q6P5Z2 889 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 SEZ6L2Q6UXD5 910 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 Q6ZS46 218 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 USP53Q70EK8 1073 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 SLC24A5Q71RS6 500 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 TMC3Q7Z5M5 1100 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 RAVER1Q8IY67 606 aaKnown RBP5.36□□□□□ -1.55
VPS41-205ENST00000414632 EXOC8Q8IYI6 725 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 MCPH1Q8NEM0 835 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 EZH1Q92800 747 aaPredicted RBP5.36□□□□□ -1.55
VPS41-205ENST00000414632 C1orf159Q96HA4 380 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 FAM46AQ96IP4 442 aaKnown RBP5.36□□□□□ -1.55
VPS41-205ENST00000414632 ZNF396Q96N95 335 aaPredicted RBP5.36□□□□□ -1.55
VPS41-205ENST00000414632 TGS1Q96RS0 853 aaKnown RBP5.36□□□□□ -1.55
VPS41-205ENST00000414632 UBL7Q96S82 380 aaPredicted RBP5.36□□□□□ -1.55
VPS41-205ENST00000414632 APOL6Q9BWW8 343 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 EIF2AQ9BY44 585 aaKnown RBP5.36□□□□□ -1.55
VPS41-205ENST00000414632 ZSCAN16Q9H4T2 348 aaPredicted RBP5.36□□□□□ -1.55
VPS41-205ENST00000414632 RC3H2Q9HBD1 1191 aaKnown RBP5.36□□□□□ -1.55
VPS41-205ENST00000414632 AGPAT5Q9NUQ2 364 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 PRR13Q9NZ81 148 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 DNM3Q9UQ16 869 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 ZDHHC9Q9Y397 364 aa5.36□□□□□ -1.55
VPS41-205ENST00000414632 SF3B6Q9Y3B4 125 aaKnown RBP5.36□□□□□ -1.55
VPS41-205ENST00000414632 TCF20Q9UGU0 1960 aaKnown RBP5.36□□□□□ -1.55
VPS41-205ENST00000414632 C5orf42Q9H799 3197 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 TCRBV16S1A1N1A0A5B0 115 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 CCDC169A6NNP5 214 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 SPTLC2O15270 562 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 ASAP2O43150 1006 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 LPXNO60711 386 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 KATNA1O75449 491 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 RASGRP1O95267 797 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 CRTAMO95727 393 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 BMP15O95972 392 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 PRKCBP05771 671 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 KRT18P05783 430 aaKnown RBP5.35□□□□□ -1.55
VPS41-205ENST00000414632 LINC00271P0C7V0 271 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 STAG3L1P0CL83 205 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 HARSP12081 509 aaKnown RBP5.35□□□□□ -1.55
VPS41-205ENST00000414632 XRCC6P12956 609 aaKnown RBP eCLIP5.35□□□□□ -1.55
VPS41-205ENST00000414632 ATF7P17544 494 aaPredicted RBP5.35□□□□□ -1.55
VPS41-205ENST00000414632 ARF4P18085 180 aaPredicted RBP5.35□□□□□ -1.55
VPS41-205ENST00000414632 LONP1P36776 959 aaKnown RBP5.35□□□□□ -1.55
VPS41-205ENST00000414632 FLT3P36888 993 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 SLC12A3P55017 1021 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 PEX3P56589 373 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 ERVK-21P61565 698 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 CDC42EP1Q00587 391 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 CYP4F3Q08477 520 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 MAPK7Q13164 816 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 GPM6BQ13491 265 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 BECN1Q14457 450 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 MXD4Q14582 209 aaPredicted RBP5.35□□□□□ -1.55
VPS41-205ENST00000414632 SLC39A14Q15043 492 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 DHCR24Q15392 516 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 PRSS53Q2L4Q9 553 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 CLLU1OSQ5K130 101 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 UBXN11Q5T124 520 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 EEF1DP3Q658K8 133 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 LHFPL2Q6ZUX7 228 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 UBE2R2Q712K3 238 aaPredicted RBP5.35□□□□□ -1.55
VPS41-205ENST00000414632 MAMDC2Q7Z304 686 aaPredicted RBP5.35□□□□□ -1.55
VPS41-205ENST00000414632 SRGAP1Q7Z6B7 1085 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 GPBP1Q86WP2 473 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 ECHDC2Q86YB7 292 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 ZBTB8OSQ8IWT0 167 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 DAW1Q8N136 415 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 TOP6BLQ8N6T0 577 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 PDILTQ8N807 584 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 SYT2Q8N9I0 419 aaPredicted RBP5.35□□□□□ -1.55
VPS41-205ENST00000414632 MAFAQ8NHW3 353 aaPredicted RBP5.35□□□□□ -1.55
VPS41-205ENST00000414632 DEPTORQ8TB45 409 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 WFDC12Q8WWY7 111 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 RAD54LQ92698 747 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 STAMQ92783 540 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 ZNF689Q96CS4 500 aaPredicted RBP5.35□□□□□ -1.55
VPS41-205ENST00000414632 CALML4Q96GE6 196 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 IFT74Q96LB3 600 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 AK8Q96MA6 479 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 DUSP23Q9BVJ7 150 aa5.35□□□□□ -1.55
VPS41-205ENST00000414632 NT5C3AQ9H0P0 336 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms