RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 GTF2H1P32780 548 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 CACNA2D1P54289 1103 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 NOP14P78316 857 aaKnown RBP15.78■□□□□ 0.12
LIMS4-201ENST00000413601 ORC1Q13415 861 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 TCERG1LQ5VWI1 586 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 KRT39Q6A163 491 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 ACOT1Q86TX2 421 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 MFSD6LQ8IWD5 586 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 MAB21L3Q8N8X9 362 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 PRSS33Q8NF86 280 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 SEMA4DQ92854 862 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 E2F7Q96AV8 911 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 TRMT2BQ96GJ1 504 aaKnown RBP15.78■□□□□ 0.12
LIMS4-201ENST00000413601 SPATA17Q96L03 361 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 MYRFLQ96LU7 910 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 BCO2Q9BYV7 579 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 ZNF518BQ9C0D4 1074 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 BRD9Q9H8M2 597 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 UXTQ9UBK9 157 aaPredicted RBP15.78■□□□□ 0.12
LIMS4-201ENST00000413601 HMGXB4Q9UGU5 601 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 MYO16Q9Y6X6 1858 aa15.78■□□□□ 0.12
LIMS4-201ENST00000413601 F8VP50 259 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 TRIM66O15016 1216 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 STX10O60499 249 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 TADA3O75528 432 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 PRAMEF12O95522 483 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 ANXA13P27216 316 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 PPP1R2P41236 205 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 NDST1P52848 882 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 STARD6P59095 220 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 MLF2Q15773 248 aaPredicted RBP15.77■□□□□ 0.12
LIMS4-201ENST00000413601 DCAF17Q5H9S7 520 aaPredicted RBP15.77■□□□□ 0.12
LIMS4-201ENST00000413601 TXNDC8Q6A555 127 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 CMTM8Q8IZV2 173 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 DEPDC1BQ8WUY9 529 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 NELFBQ8WX92 580 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 SHDQ96IW2 340 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 TNIP3Q96KP6 325 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 LRRC3BQ96PB8 259 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 DUSP9Q99956 384 aaKnown RBP15.77■□□□□ 0.12
LIMS4-201ENST00000413601 ELOVL4Q9GZR5 314 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 SMG9Q9H0W8 520 aaKnown RBP15.77■□□□□ 0.12
LIMS4-201ENST00000413601 HEBP1Q9NRV9 189 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 TMEM30AQ9NV96 361 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 ARMCX3Q9UH62 379 aaPredicted RBP15.77■□□□□ 0.12
LIMS4-201ENST00000413601 CTNND2Q9UQB3 1225 aa15.77■□□□□ 0.12
LIMS4-201ENST00000413601 DPYSL4O14531 572 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 ZNF263O14978 683 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 CD72P21854 359 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 WEE1P30291 646 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 MXI1P50539 228 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 USP46P62068 366 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 PRKCQQ04759 706 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 PHLDB3Q6NSJ2 640 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 TTI2Q6NXR4 508 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 DENND5BQ6ZUT9 1274 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 PAQR9Q6ZVX9 377 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 YAF2Q8IY57 180 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 CCDC150Q8NCX0 1101 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 FBXL13Q8NEE6 735 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 MRPS31Q92665 395 aaKnown RBP15.76■□□□□ 0.11
LIMS4-201ENST00000413601 DNASE1L2Q92874 299 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 IRF7Q92985 503 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 C8orf48Q96LL4 319 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 PRRX2Q99811 253 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 MED10Q9BTT4 135 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 FOXQ1Q9C009 403 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 NIF3L1Q9GZT8 377 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 RAB20Q9NX57 234 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 KIAA1468Q9P260 1216 aa15.76■□□□□ 0.11
LIMS4-201ENST00000413601 CCDC130P13994 396 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 CD58P19256 250 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 DDX6P26196 483 aaKnown RBP eCLIP15.75■□□□□ 0.11
LIMS4-201ENST00000413601 PLA2G5P39877 138 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 STX17P56962 302 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 FCHO2Q0JRZ9 810 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 TCF15Q12870 199 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 CBWD6Q4V339 395 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 CBWD3Q5JTY5 395 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 CBWD5Q5RIA9 395 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 TPRG1Q6ZUI0 275 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 FILIP1Q7Z7B0 1213 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 FAM35AQ86V20 835 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 MON1AQ86VX9 555 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 UNC93AQ86WB7 457 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 FUKQ8N0W3 1084 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 CRYBG2Q8N1P7 616 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 C12orf29Q8N999 325 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 SLC35C1Q96A29 364 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 FAM122AQ96E09 287 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 CEP295NLQ96MC4 621 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 CEP63Q96MT8 703 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 TWNKQ96RR1 684 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 KCNK16Q96T55 309 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 DDX23Q9BUQ8 820 aaKnown RBP15.75■□□□□ 0.11
LIMS4-201ENST00000413601 CYP3A43Q9HB55 503 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 OBP2AQ9NY56 170 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 ZMYM5Q9UJ78 669 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 SIT1Q9Y3P8 196 aa15.75■□□□□ 0.11
LIMS4-201ENST00000413601 WDFY4Q6ZS81 3184 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms