RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 NLRP12P59046 1061 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 GPC5P78333 572 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 NTHL1P78549 312 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 PDGFRLQ15198 375 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 E2F5Q15329 346 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 STILQ15468 1287 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 SLC5A9Q2M3M2 681 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 FAM78AQ5JUQ0 283 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 DGKKQ5KSL6 1271 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 GPR158Q5T848 1215 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 TANGO2Q6ICL3 276 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 GAREM2Q75VX8 874 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 ENOSF1Q7L5Y1 443 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 TADA2BQ86TJ2 420 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 RALGPS2Q86X27 583 aaPredicted RBP6.8□□□□□ -1.32
USP54-202ENST00000413442 ARID3BQ8IVW6 561 aaPredicted RBP6.8□□□□□ -1.32
USP54-202ENST00000413442 FAM114A1Q8IWE2 563 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 CMTM8Q8IZV2 173 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 SHKBP1Q8TBC3 707 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 BPIFB1Q8TDL5 484 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 CSGALNACT1Q8TDX6 532 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 OTUB2Q96DC9 234 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 SMARCD1Q96GM5 515 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 PCED1BQ96HM7 432 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 CDK5RAP1Q96SZ6 601 aaKnown RBP6.8□□□□□ -1.32
USP54-202ENST00000413442 HNRNPABQ99729 332 aaKnown RBP6.8□□□□□ -1.32
USP54-202ENST00000413442 PI4K2AQ9BTU6 479 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 NIF3L1Q9GZT8 377 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 GZF1Q9H116 711 aaPredicted RBP6.8□□□□□ -1.32
USP54-202ENST00000413442 CRISPLD1Q9H336 500 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 SLITRK6Q9H5Y7 841 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 BRD9Q9H8M2 597 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 IL21Q9HBE4 155 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 ARHGEF3Q9NR81 526 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 TRPM5Q9NZQ8 1165 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 TBC1D14Q9P2M4 693 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 NXF1Q9UBU9 619 aaKnown RBP6.8□□□□□ -1.32
USP54-202ENST00000413442 RWDD2AQ9UIY3 292 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 MAPK8IP1Q9UQF2 711 aa6.8□□□□□ -1.32
USP54-202ENST00000413442 TECTAO75443 2155 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 MYH10P35580 1976 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 TRAV19A0A0A6YYK7 116 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 A0A1W2PRU2 124 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 GTPBP10A4D1E9 387 aaKnown RBP6.79□□□□□ -1.32
USP54-202ENST00000413442 PPP1R3GB7ZBB8 358 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 STK25O00506 426 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 GALR2O43603 387 aaPredicted RBP6.79□□□□□ -1.32
USP54-202ENST00000413442 CEBPBP17676 345 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 HDCP19113 662 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 BDNFP23560 247 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 YWHAQP27348 245 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 CCR2P41597 374 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 GCLMP48507 274 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 NRLP54845 237 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 DLG4P78352 724 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 SLC7A9P82251 487 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 CYP27A1Q02318 531 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 PPP3CAQ08209 521 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 PAK1Q13153 545 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 TEAD2Q15562 447 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 MLF2Q15773 248 aaPredicted RBP6.79□□□□□ -1.32
USP54-202ENST00000413442 MEA1Q16626 185 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 ZNF528Q3MIS6 628 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 FBXO43Q4G163 708 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 C1orf220Q5T0J3 134 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 LMBRD2Q68DH5 695 aaPredicted RBP6.79□□□□□ -1.32
USP54-202ENST00000413442 TTI2Q6NXR4 508 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 CC2D1AQ6P1N0 951 aaPredicted RBP6.79□□□□□ -1.32
USP54-202ENST00000413442 NUDT18Q6ZVK8 323 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 SCN4BQ8IWT1 228 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 HS6ST3Q8IZP7 471 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 SIX5Q8N196 739 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 ARHGAP18Q8N392 663 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 PLEKHO2Q8TD55 490 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 GPR152Q8TDT2 470 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 CLDN23Q96B33 292 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 FAM122AQ96E09 287 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 TMEM176AQ96HP8 235 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 IPO9Q96P70 1041 aaKnown RBP6.79□□□□□ -1.32
USP54-202ENST00000413442 TMEM209Q96SK2 561 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 MRPL45Q9BRJ2 306 aaKnown RBP6.79□□□□□ -1.32
USP54-202ENST00000413442 SLC46A2Q9BY10 475 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 IRX2Q9BZI1 471 aaPredicted RBP6.79□□□□□ -1.32
USP54-202ENST00000413442 ZNF334Q9HCZ1 680 aaPredicted RBP6.79□□□□□ -1.32
USP54-202ENST00000413442 DMAP1Q9NPF5 467 aaPredicted RBP6.79□□□□□ -1.32
USP54-202ENST00000413442 CRTAC1Q9NQ79 661 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 TMLHEQ9NVH6 421 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 CDH22Q9UJ99 828 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 MAN1B1Q9UKM7 699 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 FBXO4Q9UKT5 387 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 DAAM1Q9Y4D1 1078 aa6.79□□□□□ -1.32
USP54-202ENST00000413442 C5orf42Q9H799 3197 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 ANAPC1Q9H1A4 1944 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 HEPACAM2A8MVW5 462 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 PROB1E7EW31 1015 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 ATG13O75143 517 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 CILPO75339 1184 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 MBD3O95983 291 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 CFHP08603 1231 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 PAEPP09466 180 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms