RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 FAM117BQ6P1L5 589 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 FUT10Q6P4F1 479 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 FAM171BQ6P995 826 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 PSRC1Q6PGN9 363 aaPredicted RBP7.02□□□□□ -1.29
VPS41-204ENST00000413141 CLEC20AQ6ZU45 233 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 PAQR9Q6ZVX9 377 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 OTOP2Q7RTS6 562 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 PEX26Q7Z412 305 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 PHLDB2Q86SQ0 1253 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 NT5DC3Q86UY8 548 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 CMTR2Q8IYT2 770 aaKnown RBP7.02□□□□□ -1.29
VPS41-204ENST00000413141 THEM5Q8N1Q8 247 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 MYCBPAPQ8TBZ2 947 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 STK32AQ8WU08 396 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 SLC35F5Q8WV83 523 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 C18orf8Q96DM3 657 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 MCRS1Q96EZ8 462 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 PCED1BQ96HM7 432 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 BTBD6Q96KE9 485 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 MCEEQ96PE7 176 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 TMEM209Q96SK2 561 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 MED10Q9BTT4 135 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 SLC4A5Q9BY07 1137 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 B3GNT5Q9BYG0 378 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 GPR62Q9BZJ7 368 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 TRIM7Q9C029 511 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 MIS12Q9H081 205 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 MRPL47Q9HD33 250 aaKnown RBP7.02□□□□□ -1.29
VPS41-204ENST00000413141 ABCB6Q9NP58 842 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 CYLDQ9NQC7 956 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 ST7Q9NRC1 585 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 WDR35Q9P2L0 1181 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 SNX12Q9UMY4 172 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 PACSIN2Q9UNF0 486 aaPredicted RBP7.02□□□□□ -1.29
VPS41-204ENST00000413141 FAN1Q9Y2M0 1017 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 HYOU1Q9Y4L1 999 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 SAR1BQ9Y6B6 198 aa7.02□□□□□ -1.29
VPS41-204ENST00000413141 PTPRDP23468 1912 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 COL4A4P53420 1690 aaPredicted RBP7.01□□□□□ -1.29
VPS41-204ENST00000413141 TMEM191CA6NGB0 347 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 TMEM110-MUSTN1A8MSY1 372 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 ZBBXA8MT70 800 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 NT5C1B-RDH14C9J2C7 533 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 GOLGA8SH3BPF8 625 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 RIOK3O14730 519 aaKnown RBP7.01□□□□□ -1.29
VPS41-204ENST00000413141 AP1G2O75843 785 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 BEST1O76090 585 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 PROSCO94903 275 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 EFEMP2O95967 443 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 FGBP02675 491 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 ALDH2P05091 517 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 PRLRP16471 622 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 SYN1P17600 705 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 TCP1P17987 556 aaKnown RBP7.01□□□□□ -1.29
VPS41-204ENST00000413141 LAG3P18627 525 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 MAN1A1P33908 653 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 ALDH7A1P49419 539 aaKnown RBP7.01□□□□□ -1.29
VPS41-204ENST00000413141 CACNA2D1P54289 1103 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 EPHB4P54760 987 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 SLC8A3P57103 927 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 RPL7AP62424 266 aaKnown RBP7.01□□□□□ -1.29
VPS41-204ENST00000413141 TSPY1Q01534 308 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 ZNF252P-AS1Q0IIN9 211 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 TUBB2AQ13885 445 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 MRPL58Q14197 206 aaKnown RBP7.01□□□□□ -1.29
VPS41-204ENST00000413141 BTG3Q14201 252 aaPredicted RBP7.01□□□□□ -1.29
VPS41-204ENST00000413141 ZNF268Q14587 947 aaPredicted RBP7.01□□□□□ -1.29
VPS41-204ENST00000413141 MESDQ14696 234 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 MAPRE1Q15691 268 aaKnown RBP7.01□□□□□ -1.29
VPS41-204ENST00000413141 RTP2Q5QGT7 225 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 TMEM240Q5SV17 173 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 FAM102AQ5T9C2 384 aaPredicted RBP7.01□□□□□ -1.29
VPS41-204ENST00000413141 FAM171A1Q5VUB5 890 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 ZNF280DQ6N043 979 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 OLFML1Q6UWY5 402 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 FAM183BPQ6ZVS7 135 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 ZNF365Q70YC5 407 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 TMEM110Q86TL2 294 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 PIGZQ86VD9 579 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 CPNE8Q86YQ8 564 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 RNF168Q8IYW5 571 aaPredicted RBP7.01□□□□□ -1.29
VPS41-204ENST00000413141 ZMIZ2Q8NF64 920 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 FEZF2Q8TBJ5 459 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 CD101Q93033 1021 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 SMARCD1Q96GM5 515 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 HES6Q96HZ4 224 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 IGSF21Q96ID5 467 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 PIWIL1Q96J94 861 aaKnown RBP7.01□□□□□ -1.29
VPS41-204ENST00000413141 B3GALT6Q96L58 329 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 ZNF558Q96NG5 402 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 OSBPL9Q96SU4 736 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 YME1L1Q96TA2 773 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 PSMB7Q99436 277 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.01□□□□□ -1.291e-8■■□□□ 11.9
VPS41-204ENST00000413141 HTATIP2Q9BUP3 242 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 TUBB2BQ9BVA1 445 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 SELENOOQ9BVL4 669 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 VN1R3Q9BXE9 311 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 DUSP16Q9BY84 665 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 RHOBTB2Q9BYZ6 727 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms