RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 MMS19Q96T76 1030 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 SLC46A2Q9BY10 475 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 CD93Q9NPY3 652 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 ASCL3Q9NQ33 180 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 DUS2Q9NX74 493 aaKnown RBP7.69□□□□□ -1.18
UBE2F-204ENST00000409953 MAFFQ9ULX9 164 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 NFE2L3Q9Y4A8 694 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 SNX11Q9Y5W9 270 aa7.69□□□□□ -1.18
UBE2F-204ENST00000409953 E2F8A0AVK6 867 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 H7C4K7 107 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 NPTXRO95502 500 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 LDOC1O95751 146 aaPredicted RBP7.68□□□□□ -1.18
UBE2F-204ENST00000409953 CPB1P15086 417 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 AXLP30530 894 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 AVPR1AP37288 418 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 OPRD1P41143 372 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 CSNK1EP49674 416 aaKnown RBP7.68□□□□□ -1.18
UBE2F-204ENST00000409953 INF2Q27J81 1249 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 CTXN3Q4LDR2 81 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 EMC10Q5UCC4 262 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 CD300LGQ6UXG3 332 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 ATCAYQ86WG3 371 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 PLA2G4DQ86XP0 818 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 SREK1Q8WXA9 508 aaKnown RBP7.68□□□□□ -1.18
UBE2F-204ENST00000409953 GCNAQ96QF7 691 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 CCNL2Q96S94 520 aaPredicted RBP7.68□□□□□ -1.18
UBE2F-204ENST00000409953 CEP89Q96ST8 783 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 UBAC1Q9BSL1 405 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 SLC6A16Q9GZN6 736 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 KIF9Q9HAQ2 790 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 ANK1P16157 1881 aa7.68□□□□□ -1.18
UBE2F-204ENST00000409953 A0A087X0B3 334 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 H0Y8X5 98 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 KCNK3O14649 394 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 LUC7L3O95232 432 aaKnown RBP7.67□□□□□ -1.18
UBE2F-204ENST00000409953 SMARCA1P28370 1054 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 CDC25CP30307 473 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 IFNAR2P48551 515 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 NT5C2P49902 561 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 INSM1Q01101 510 aaPredicted RBP7.67□□□□□ -1.18
UBE2F-204ENST00000409953 NR1H3Q13133 447 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 CLN3Q13286 438 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 MTF1Q14872 753 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 APBB1IPQ7Z5R6 666 aaPredicted RBP7.67□□□□□ -1.18
UBE2F-204ENST00000409953 DNAJB7Q7Z6W7 309 aaPredicted RBP7.67□□□□□ -1.18
UBE2F-204ENST00000409953 CDR2LQ86X02 465 aaPredicted RBP7.67□□□□□ -1.18
UBE2F-204ENST00000409953 TRMT2AQ8IZ69 625 aaKnown RBP7.67□□□□□ -1.18
UBE2F-204ENST00000409953 C3orf58Q8NDZ4 430 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 TTC16Q8NEE8 873 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 OSCP1Q8WVF1 389 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 RFFLQ8WZ73 363 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 IGSF8Q969P0 613 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 PSMG2Q969U7 264 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 MIB2Q96AX9 1013 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 SGF29Q96ES7 293 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 RRP36Q96EU6 259 aaKnown RBP7.67□□□□□ -1.18
UBE2F-204ENST00000409953 ZNF577Q9BSK1 485 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 CXCL16Q9H2A7 254 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 POLR1BQ9H9Y6 1135 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 TBC1D22BQ9NU19 505 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 TDP1Q9NUW8 608 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 GEMIN8Q9NWZ8 242 aaKnown RBP7.67□□□□□ -1.18
UBE2F-204ENST00000409953 ZSWIM5Q9P217 1185 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 SEC63Q9UGP8 760 aaKnown RBP7.67□□□□□ -1.18
UBE2F-204ENST00000409953 ANAPC2Q9UJX6 822 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 AKAP9Q99996 3911 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 CSMD2Q7Z408 3487 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 CCDC168Q8NDH2 2452 aa7.67□□□□□ -1.18
UBE2F-204ENST00000409953 TMEM131Q92545 1883 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 LRRK1Q38SD2 2015 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 WDR64B1ANS9 1081 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 FAM86B1E9PN63 330 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 EFSO43281 561 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 HMMRO75330 724 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 VNN2O95498 520 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 MT-CO3P00414 261 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 C8BP07358 591 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 FAM86B2P0C5J1 330 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 NCAM1P13591 858 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 KIR2DL1P43626 348 aaPredicted RBP7.66□□□□□ -1.18
UBE2F-204ENST00000409953 ALDH1A3P47895 512 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 UQCRFS1P47985 274 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 LSSP48449 732 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 CLCNKBP51801 687 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 SKOR1P84550 965 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 NCBP1Q09161 790 aaKnown RBP7.66□□□□□ -1.18
UBE2F-204ENST00000409953 MESP2Q0VG99 397 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 EML3Q32P44 896 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 DCAF12L1Q5VU92 463 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 ZKSCAN2Q63HK3 967 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 ZNF280DQ6N043 979 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 NIPA1Q7RTP0 329 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 GATAD2AQ86YP4 633 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 EFCAB13Q8IY85 973 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 MAB21L3Q8N8X9 362 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 RNF149Q8NC42 400 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 ERLEC1Q96DZ1 483 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 YTHDC1Q96MU7 727 aaKnown RBP7.66□□□□□ -1.18
UBE2F-204ENST00000409953 PGLYRP2Q96PD5 576 aa7.66□□□□□ -1.18
UBE2F-204ENST00000409953 CRISPLD1Q9H336 500 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms