RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 PRLRP16471 622 aa13.14□□□□□ -0.31
CHMP3-204ENST00000409727 PCSK1P29120 753 aa13.14□□□□□ -0.31
CHMP3-204ENST00000409727 YWHAHQ04917 246 aaPredicted RBP13.14□□□□□ -0.31
CHMP3-204ENST00000409727 FAM102AQ5T9C2 384 aaPredicted RBP13.14□□□□□ -0.31
CHMP3-204ENST00000409727 FAM183BPQ6ZVS7 135 aa13.14□□□□□ -0.31
CHMP3-204ENST00000409727 LRRC43Q8N309 656 aa13.14□□□□□ -0.31
CHMP3-204ENST00000409727 EMC1Q8N766 993 aa13.14□□□□□ -0.31
CHMP3-204ENST00000409727 CEP112Q8N8E3 955 aa13.14□□□□□ -0.31
CHMP3-204ENST00000409727 KRT35Q92764 455 aa13.14□□□□□ -0.31
CHMP3-204ENST00000409727 PIWIL1Q96J94 861 aaKnown RBP13.14□□□□□ -0.31
CHMP3-204ENST00000409727 MRPL9Q9BYD2 267 aaKnown RBP13.14□□□□□ -0.31
CHMP3-204ENST00000409727 B3GNT5Q9BYG0 378 aa13.14□□□□□ -0.31
CHMP3-204ENST00000409727 RHOBTB2Q9BYZ6 727 aa13.14□□□□□ -0.31
CHMP3-204ENST00000409727 PCDHB8Q9UN66 801 aa13.14□□□□□ -0.31
CHMP3-204ENST00000409727 FAN1Q9Y2M0 1017 aa13.14□□□□□ -0.31
CHMP3-204ENST00000409727 TSC2P49815 1807 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 TMEM191CA6NGB0 347 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 DDX3YO15523 660 aaKnown RBP13.13□□□□□ -0.31
CHMP3-204ENST00000409727 CEP104O60308 925 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 CYP11A1P05108 521 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 RFC1P35251 1148 aaPredicted RBP13.13□□□□□ -0.31
CHMP3-204ENST00000409727 GJC1P36383 396 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 MAP3K7CLP57077 242 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 OGDHQ02218 1023 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 ZNF211Q13398 564 aaPredicted RBP13.13□□□□□ -0.31
CHMP3-204ENST00000409727 PAQR9Q6ZVX9 377 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 TMEM173Q86WV6 379 aaPredicted RBP13.13□□□□□ -0.31
CHMP3-204ENST00000409727 THEM5Q8N1Q8 247 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 JOSD2Q8TAC2 188 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 ALG3Q92685 438 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 HNRNPABQ99729 332 aaKnown RBP13.13□□□□□ -0.31
CHMP3-204ENST00000409727 COLEC11Q9BWP8 271 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 PRDM10Q9NQV6 1147 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 MARCH5Q9NX47 278 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 ADAM28Q9UKQ2 775 aa13.13□□□□□ -0.31
CHMP3-204ENST00000409727 ABHD14A-ACY1A0A1B0GW23 586 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 CTAGE15A4D2H0 777 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 TMEM189-UBE2V1I3L0A0 370 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 TRAPPC3O43617 180 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 GABBR2O75899 941 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 DGKIO75912 1065 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 PROSCO94903 275 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 AMHP03971 560 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 OR4Q2P0C623 313 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 FAM200BP0CF97 657 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 CTAGE8P0CG41 777 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 SETSIPP0DME0 302 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 NPR3P17342 541 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 GABRB2P47870 512 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 SLC8A3P57103 927 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 CKAP4Q07065 602 aaKnown RBP13.12□□□□□ -0.31
CHMP3-204ENST00000409727 ZNF268Q14587 947 aaPredicted RBP13.12□□□□□ -0.31
CHMP3-204ENST00000409727 INTS6LQ5JSJ4 861 aaKnown RBP13.12□□□□□ -0.31
CHMP3-204ENST00000409727 PPP1R15BQ5SWA1 713 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 TEX35Q5T0J7 233 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 SPOUT1Q5T280 376 aaKnown RBP13.12□□□□□ -0.31
CHMP3-204ENST00000409727 FAM171A1Q5VUB5 890 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 CTAGE6Q86UF2 777 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 FAM35AQ86V20 835 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 CTAGE4Q8IX94 777 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 UBL4BQ8N7F7 174 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 MYCBPAPQ8TBZ2 947 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 CLEC4CQ8WTT0 213 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 MYLPFQ96A32 169 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 ACBD6Q9BR61 282 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 SLC4A5Q9BY07 1137 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 DUSP16Q9BY84 665 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 GPR62Q9BZJ7 368 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 TMLHEQ9NVH6 421 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 WDR35Q9P2L0 1181 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 PRKAG2Q9UGJ0 569 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 IP6K2Q9UHH9 426 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 ARHGEF37A1IGU5 675 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 SIGLEC16A6NMB1 481 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 AP1G2O75843 785 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 GALTP07902 379 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 TYMPP19971 482 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 PAX3P23760 479 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 PAFAH1B1P43034 410 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 CACNA2D1P54289 1103 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 WDR5P61964 334 aaKnown RBP13.12□□□□□ -0.31
CHMP3-204ENST00000409727 C2orf54Q08AI8 447 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 ZNF252P-AS1Q0IIN9 211 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 TAF5Q15542 800 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 ERCC6LQ2NKX8 1250 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 DCAF12L1Q5VU92 463 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 FAM43BQ6ZT52 329 aaPredicted RBP13.12□□□□□ -0.31
CHMP3-204ENST00000409727 CLEC20AQ6ZU45 233 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 PIGZQ86VD9 579 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 LRRTM3Q86VH5 581 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 TOP1MTQ969P6 601 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 KCNK16Q96T55 309 aa13.12□□□□□ -0.31
CHMP3-204ENST00000409727 FNDC1Q4ZHG4 1894 aaPredicted RBP13.11□□□□□ -0.31
CHMP3-204ENST00000409727 ZBBXA8MT70 800 aa13.11□□□□□ -0.31
CHMP3-204ENST00000409727 MIF4GDA9UHW6 222 aaKnown RBP13.11□□□□□ -0.31
CHMP3-204ENST00000409727 F8VP50 259 aa13.11□□□□□ -0.31
CHMP3-204ENST00000409727 PAPSS1O43252 624 aaPredicted RBP13.11□□□□□ -0.31
CHMP3-204ENST00000409727 TADA3O75528 432 aa13.11□□□□□ -0.31
CHMP3-204ENST00000409727 PSMA2P25787 234 aa13.11□□□□□ -0.31
CHMP3-204ENST00000409727 ALDH7A1P49419 539 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms