RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CDY1Q9Y6F8 540 aa11.95□□□□□ -0.5
SNX13-202ENST00000409604 ARL5CA6NH57 179 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 MDM4O15151 490 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 TMEM253P0C7T8 217 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 HOXD13P35453 343 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 ANO4Q32M45 955 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 EFHBQ8N7U6 833 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 TMEM40Q8WWA1 233 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 THOC1Q96FV9 657 aaKnown RBP11.94□□□□□ -0.5
SNX13-202ENST00000409604 MUC3BQ9H195 1237 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 IFT122Q9HBG6 1241 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 NKIRAS1Q9NYS0 192 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 RSPH14Q9UHP6 348 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 AJAP1Q9UKB5 411 aaPredicted RBP11.94□□□□□ -0.5
SNX13-202ENST00000409604 POLR2AP24928 1970 aaKnown RBP11.94□□□□□ -0.5
SNX13-202ENST00000409604 A0A1W2PQJ5 194 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 CCDC66A2RUB6 948 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 LRRC10BA6NIK2 292 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 CYP2F1P24903 491 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 RFC1P35251 1148 aaPredicted RBP11.94□□□□□ -0.5
SNX13-202ENST00000409604 ZNF131P52739 623 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 SARNPP82979 210 aaKnown RBP11.94□□□□□ -0.5
SNX13-202ENST00000409604 PRSS55Q6UWB4 352 aaPredicted RBP11.94□□□□□ -0.5
SNX13-202ENST00000409604 SLC24A5Q71RS6 500 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 DDX53Q86TM3 631 aaKnown RBP11.94□□□□□ -0.5
SNX13-202ENST00000409604 CD302Q8IX05 232 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 FAM71DQ8N9W8 422 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 CCDC110Q8TBZ0 833 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 EXT2Q93063 718 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 RMDN1Q96DB5 314 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 FMO2Q99518 471 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.94□□□□□ -0.5
SNX13-202ENST00000409604 FSD1LQ9BXM9 530 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 RAB6BQ9NRW1 208 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 PLK2Q9NYY3 685 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.94□□□□□ -0.5
SNX13-202ENST00000409604 SH3BP1Q9Y3L3 701 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 SLC4A7Q9Y6M7 1214 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 EEF2KO00418 725 aaKnown RBP11.94□□□□□ -0.5
SNX13-202ENST00000409604 ZNF865P0CJ78 1059 aaPredicted RBP11.94□□□□□ -0.5
SNX13-202ENST00000409604 EZRP15311 586 aaKnown RBP11.94□□□□□ -0.5
SNX13-202ENST00000409604 CSF2RAP15509 400 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 OAS2P29728 719 aaKnown RBP11.94□□□□□ -0.5
SNX13-202ENST00000409604 BCAT1P54687 386 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 TUBB2AQ13885 445 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 CCDC142Q17RM4 750 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 TPGS1Q6ZTW0 290 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 RAPH1Q70E73 1250 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 OR6P1Q8NGX9 317 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 KRT35Q92764 455 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 TUBB2BQ9BVA1 445 aa11.94□□□□□ -0.5
SNX13-202ENST00000409604 ZSCAN5CA6NGD5 496 aaPredicted RBP11.93□□□□□ -0.5
SNX13-202ENST00000409604 FAM47DPA6NHR8 397 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 F2P00734 622 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 TMED2Q15363 201 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 SLC39A4Q6P5W5 647 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 BBS5Q8N3I7 341 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 TTC39CQ8N584 583 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 LRRN4CLQ8ND94 238 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 FAM76AQ8TAV0 307 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 SARS2Q9NP81 518 aaKnown RBP11.93□□□□□ -0.5
SNX13-202ENST00000409604 UBN1Q9NPG3 1134 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 HMGXB4Q9UGU5 601 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 UBR3Q6ZT12 1888 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 KRT14P02533 472 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 RECQLP46063 649 aaPredicted RBP11.93□□□□□ -0.5
SNX13-202ENST00000409604 MARCKSL1P49006 195 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 C1QTNF8P60827 252 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 CCDC13Q8IYE1 715 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 SLC25A41Q8N5S1 370 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 ATP11CQ8NB49 1132 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 ARNTL2Q8WYA1 636 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 ZNF516Q92618 1163 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 FAM136AQ96C01 138 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 RPGRIP1Q96KN7 1286 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 KCNK16Q96T55 309 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 ZNF518BQ9C0D4 1074 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 HSD3B7Q9H2F3 369 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 APOBEC3GQ9HC16 384 aaKnown RBP11.93□□□□□ -0.5
SNX13-202ENST00000409604 UVRAGQ9P2Y5 699 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 PGAP2Q9UHJ9 254 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 FIS1Q9Y3D6 152 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 LHX1P48742 406 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 RAB27AP51159 221 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 CLCN6P51797 869 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 TAF5Q15542 800 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 CLUL1Q15846 466 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 CCDC38Q502W7 563 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 PRUNE1Q86TP1 453 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 MCOLN2Q8IZK6 566 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 GSDMBQ8TAX9 411 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 PLEKHO2Q8TD55 490 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 PYROXD1Q8WU10 500 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 TBC1D31Q96DN5 1066 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 SCYL1Q96KG9 808 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 EPAS1Q99814 870 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 KANSL3Q9P2N6 904 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 ADAMTS5Q9UNA0 930 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 KAT6AQ92794 2004 aa11.93□□□□□ -0.5
SNX13-202ENST00000409604 ARVCFO00192 962 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms