RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 C9orf50Q5SZB4 431 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 OR6B2Q6IFH4 312 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 ZNF662Q6ZS27 426 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 CLEC4CQ8WTT0 213 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 AUTS2Q8WXX7 1259 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 TMEM169Q96HH4 297 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 KCNK16Q96T55 309 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 LHX5Q9H2C1 402 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 METTL5Q9NRN9 209 aaKnown RBP16.54■□□□□ 0.24
SHANK2-204ENST00000409530 TMEM30AQ9NV96 361 aa16.54■□□□□ 0.24
SHANK2-204ENST00000409530 ARHGEF37A1IGU5 675 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 CTAGE9A4FU28 777 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 TLL1O43897 1013 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 CYP1A2P05177 515 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 CALB1P05937 261 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 FAM200BP0CF97 657 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 TYMPP19971 482 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 CDH5P33151 784 aaPredicted RBP16.53■□□□□ 0.24
SHANK2-204ENST00000409530 RPL7AP62424 266 aaKnown RBP16.53■□□□□ 0.24
SHANK2-204ENST00000409530 C1QBPQ07021 282 aaKnown RBP16.53■□□□□ 0.24
SHANK2-204ENST00000409530 FAM102AQ5T9C2 384 aaPredicted RBP16.53■□□□□ 0.24
SHANK2-204ENST00000409530 ARHGAP17Q68EM7 881 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 KIAA1841Q6NSI8 718 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 PAQR9Q6ZVX9 377 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 RHOT2Q8IXI1 618 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 COLGALT1Q8NBJ5 622 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 MYCBPAPQ8TBZ2 947 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 TRIM11Q96F44 468 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 IGSF21Q96ID5 467 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 NAPGQ99747 312 aaPredicted RBP16.53■□□□□ 0.24
SHANK2-204ENST00000409530 ACBD6Q9BR61 282 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 VN1R3Q9BXE9 311 aa16.53■□□□□ 0.24
SHANK2-204ENST00000409530 GRXCR1A8MXD5 290 aa16.52■□□□□ 0.24
SHANK2-204ENST00000409530 CXCR5P32302 372 aa16.52■□□□□ 0.24
SHANK2-204ENST00000409530 GJC1P36383 396 aa16.52■□□□□ 0.24
SHANK2-204ENST00000409530 ZNF280DQ6N043 979 aa16.52■□□□□ 0.24
SHANK2-204ENST00000409530 DCUN1D2Q6PH85 259 aa16.52■□□□□ 0.24
SHANK2-204ENST00000409530 CLEC20AQ6ZU45 233 aa16.52■□□□□ 0.24
SHANK2-204ENST00000409530 FAM183BPQ6ZVS7 135 aa16.52■□□□□ 0.24
SHANK2-204ENST00000409530 NLRC5Q86WI3 1866 aa16.52■□□□□ 0.24
SHANK2-204ENST00000409530 CMTR2Q8IYT2 770 aaKnown RBP16.52■□□□□ 0.24
SHANK2-204ENST00000409530 EMC1Q8N766 993 aa16.52■□□□□ 0.24
SHANK2-204ENST00000409530 ANKRD52Q8NB46 1076 aa16.52■□□□□ 0.24
SHANK2-204ENST00000409530 MSANTD4Q8NCY6 345 aa16.52■□□□□ 0.24
SHANK2-204ENST00000409530 RIN2Q8WYP3 895 aaPredicted RBP16.52■□□□□ 0.24
SHANK2-204ENST00000409530 C18orf8Q96DM3 657 aa16.52■□□□□ 0.24
SHANK2-204ENST00000409530 SELENOOQ9BVL4 669 aa16.52■□□□□ 0.24
SHANK2-204ENST00000409530 SRGAP2O75044 1071 aa16.52■□□□□ 0.23
SHANK2-204ENST00000409530 MYOGP15173 224 aa16.52■□□□□ 0.23
SHANK2-204ENST00000409530 NPR3P17342 541 aa16.52■□□□□ 0.23
SHANK2-204ENST00000409530 ADIGQ0VDE8 80 aa16.52■□□□□ 0.23
SHANK2-204ENST00000409530 SPRED2Q7Z698 418 aa16.52■□□□□ 0.23
SHANK2-204ENST00000409530 PIGZQ86VD9 579 aa16.52■□□□□ 0.23
SHANK2-204ENST00000409530 XYLT1Q86Y38 959 aa16.52■□□□□ 0.23
SHANK2-204ENST00000409530 SPATA2LQ8IUW3 424 aaPredicted RBP16.52■□□□□ 0.23
SHANK2-204ENST00000409530 HERC6Q8IVU3 1022 aa16.52■□□□□ 0.23
SHANK2-204ENST00000409530 SCUBE3Q8IX30 993 aa16.52■□□□□ 0.23
SHANK2-204ENST00000409530 FIBCD1Q8N539 461 aa16.52■□□□□ 0.23
SHANK2-204ENST00000409530 RNF10Q8N5U6 811 aaKnown RBP16.52■□□□□ 0.23
SHANK2-204ENST00000409530 NDRG1Q92597 394 aaKnown RBP16.52■□□□□ 0.23
SHANK2-204ENST00000409530 HNRNPABQ99729 332 aaKnown RBP16.52■□□□□ 0.23
SHANK2-204ENST00000409530 TTPALQ9BTX7 342 aa16.52■□□□□ 0.23
SHANK2-204ENST00000409530 USTQ9Y2C2 406 aa16.52■□□□□ 0.23
SHANK2-204ENST00000409530 A0A0A6YYK5 440 aaPredicted RBP16.51■□□□□ 0.23
SHANK2-204ENST00000409530 SYN3O14994 580 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 MYBL1P10243 752 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 LAG3P18627 525 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 SSR1P43307 286 aaKnown RBP16.51■□□□□ 0.23
SHANK2-204ENST00000409530 MAGEA10P43363 369 aaPredicted RBP16.51■□□□□ 0.23
SHANK2-204ENST00000409530 SLC8A3P57103 927 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 MAMLD1Q13495 774 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 IFI16Q16666 785 aaKnown RBP16.51■□□□□ 0.23
SHANK2-204ENST00000409530 PKDCCQ504Y2 493 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 FAM109BQ6ICB4 259 aaPredicted RBP16.51■□□□□ 0.23
SHANK2-204ENST00000409530 RSPO2Q6UXX9 243 aaPredicted RBP16.51■□□□□ 0.23
SHANK2-204ENST00000409530 SCN4BQ8IWT1 228 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 TNS4Q8IZW8 715 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 TTC9BQ8N6N2 239 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 CAPZA3Q96KX2 299 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 PCDHGC5Q9Y5F6 944 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 CDY1Q9Y6F8 540 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 BTNL10A8MVZ5 291 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 SOAT2O75908 522 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 FGFR3P22607 806 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 CYP2F1P24903 491 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 TAF5Q15542 800 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 SDHAF4Q5VUM1 108 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.51■□□□□ 0.23
SHANK2-204ENST00000409530 GPRIN1Q7Z2K8 1008 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 PEX26Q7Z412 305 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 JOSD2Q8TAC2 188 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 SLC35F5Q8WV83 523 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 SMARCD1Q96GM5 515 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 SMOQ99835 787 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 DUSP16Q9BY84 665 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 PARVAQ9NVD7 372 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 SCINQ9Y6U3 715 aa16.51■□□□□ 0.23
SHANK2-204ENST00000409530 GBF1Q92538 1859 aa16.5■□□□□ 0.23
SHANK2-204ENST00000409530 ATP8B3O60423 1300 aa16.5■□□□□ 0.23
SHANK2-204ENST00000409530 ELAVL2Q12926 359 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms