RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 NCAM1P13591 858 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 C4BPBP20851 252 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 SERPINB1P30740 379 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 GDI1P31150 447 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 OR1D2P34982 312 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 SEC13P55735 322 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 DMPKQ09013 629 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 ZNF284Q2VY69 593 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 MFSD5Q6N075 450 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 OLFML1Q6UWY5 402 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 TPGS1Q6ZTW0 290 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 IGSF22Q8N9C0 903 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 MYLIPQ8WY64 445 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 HERVK_113Q902F9 699 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 SNX21Q969T3 373 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 SCYL1Q96KG9 808 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 ELOVL2Q9NXB9 296 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 KLHL8Q9P2G9 620 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 CAB39Q9Y376 341 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 TIMM13Q9Y5L4 95 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 RHOCP08134 193 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 AMD1P17707 334 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 ACO1P21399 889 aaKnown RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 GARSP41250 739 aaKnown RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 ZNF75DP51815 510 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 RESTQ13127 1097 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 ATAD3BQ5T9A4 648 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 PTCRAQ6ISU1 281 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 PLPPR4Q7Z2D5 763 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 OSCP1Q8WVF1 389 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 POF1BQ8WVV4 589 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 THAP11Q96EK4 314 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 TRIM15Q9C019 465 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 CNOT10Q9H9A5 744 aaKnown RBP7.62□□□□□ -1.19
SCN9A-202ENST00000409435 NDFIP2Q9NV92 336 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 RBPJLQ9UBG7 517 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 LCMT1Q9UIC8 334 aa7.62□□□□□ -1.19
SCN9A-202ENST00000409435 SLC26A4O43511 780 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 KRT6AP02538 564 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 KRT6BP04259 564 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 KRT1P04264 644 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 SERPIND1P05546 499 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 MMEP08473 750 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 ARP10275 920 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 GARTP22102 1010 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 CDC25AP30304 524 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 KRT6CP48668 564 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 MORC3Q14149 939 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 HP1BP3Q5SSJ5 553 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-202ENST00000409435 LUZP2Q86TE4 346 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 NRSN1Q8IZ57 195 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 LZICQ8WZA0 190 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 IRF7Q92985 503 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 PABPC5Q96DU9 382 aaKnown RBP7.61□□□□□ -1.19
SCN9A-202ENST00000409435 ZWILCHQ9H900 591 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 FANCEQ9HB96 536 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 GID8Q9NWU2 228 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 RHBDL2Q9NX52 303 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 C6orf203Q9P0P8 240 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-202ENST00000409435 COL1A2P08123 1366 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 EXTL3O43909 919 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 GNA15P30679 374 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 RPIAP49247 311 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 NCOA4Q13772 614 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 RCN2Q14257 317 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 FBXO47Q5MNV8 452 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 DARS2Q6PI48 645 aaKnown RBP7.61□□□□□ -1.19
SCN9A-202ENST00000409435 GPIHBP1Q8IV16 184 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 CDKL2Q92772 493 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 LPPQ93052 612 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 DHTKD1Q96HY7 919 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-202ENST00000409435 ALG13Q9NP73 1137 aaKnown RBP7.61□□□□□ -1.19
SCN9A-202ENST00000409435 DEC1Q9P2X7 70 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 STK36Q9NRP7 1315 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 RB1P06400 928 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 SYPP08247 313 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 CHKAP35790 457 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 MDH1BQ5I0G3 518 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 FAM102AQ5T9C2 384 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-202ENST00000409435 COL13A1Q5TAT6 717 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-202ENST00000409435 FBXL19Q6PCT2 694 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 CCDC105Q8IYK2 499 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 TMA16Q96EY4 203 aaKnown RBP7.61□□□□□ -1.19
SCN9A-202ENST00000409435 OSGEPL1Q9H4B0 414 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 DUS2Q9NX74 493 aaKnown RBP7.61□□□□□ -1.19
SCN9A-202ENST00000409435 ZNF510Q9Y2H8 683 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 SAR1BQ9Y6B6 198 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 LRRC72A6NJI9 287 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 NR3C1P04150 777 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 TPP2P29144 1249 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-202ENST00000409435 GUCY2FP51841 1108 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 PPARDQ03181 441 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 NNTQ13423 1086 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 CUL1Q13616 776 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 LAMB3Q13751 1172 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 GRB14Q14449 540 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 FSCBQ5H9T9 825 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 OR9Q1Q8NGQ5 310 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 CXorf40AQ8TE69 158 aa7.61□□□□□ -1.19
SCN9A-202ENST00000409435 CCDC3Q9BQI4 270 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms