RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 Q9H521 79 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 UBAP1Q9NZ09 502 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 CLIC5Q9NZA1 410 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 HBS1LQ9Y450 684 aaKnown RBP11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 NUMBLQ9Y6R0 609 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 NFASCO94856 1347 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 ESYT2A0FGR8 921 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 C19orf81C9J6K1 198 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 TRMUO75648 421 aaKnown RBP11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 CLPTM1O96005 669 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 CD48P09326 243 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 ZNF12P17014 697 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 CETN2P41208 172 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 NR1H2P55055 460 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 FCGRTP55899 365 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 HDAC4P56524 1084 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 MLLT1Q03111 559 aaPredicted RBP11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 RELAQ04206 551 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 PPP2R5CQ13362 524 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 CTTNQ14247 550 aaKnown RBP11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 LPIN1Q14693 890 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 NFIL3Q16649 462 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 INF2Q27J81 1249 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 RWDD4Q6NW29 188 aaKnown RBP11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 NEPROQ6NW34 567 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 RBM44Q6ZP01 1051 aaKnown RBP11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 NEK8Q86SG6 692 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 CHSY1Q86X52 802 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 DGKHQ86XP1 1220 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 ZNF276Q8N554 614 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 SNRNP27Q8WVK2 155 aaKnown RBP11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 CEP95Q96GE4 821 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 NLRP4Q96MN2 994 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 PLIN2Q99541 437 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 TRABDQ9H4I3 376 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 S100A14Q9HCY8 104 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 MLXIPLQ9NP71 852 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 SLCO1B3Q9NPD5 702 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 OSGEPQ9NPF4 335 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 UVRAGQ9P2Y5 699 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 AK5Q9Y6K8 562 aa11.14□□□□□ -0.63
NIF3L1-204ENST00000409357 A0A0G2JMZ2 1700 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 COL11A1P12107 1806 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 SOBPA7XYQ1 873 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 CAPN14A8MX76 684 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 ANKRD63C9JTQ0 380 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 ZNF701M0R085 212 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 KLF11O14901 512 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 ADAMTS3O15072 1205 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 P4HA2O15460 535 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 TPD52L2O43399 206 aaKnown RBP11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 SLC9A1P19634 815 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 ARFIP2P53365 341 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 PPIDQ08752 370 aaKnown RBP11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 ADCY1Q08828 1119 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 CAMK2BQ13554 666 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 APOFQ13790 326 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 GRM4Q14833 912 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 INAQ16352 499 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 PLEKHG4Q58EX7 1191 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 TMEM53Q6P2H8 277 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 USP17L2Q6R6M4 530 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 SAMD3Q8N6K7 520 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 ABTB1Q969K4 478 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 COX4I2Q96KJ9 171 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 C12orf42Q96LP6 360 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 NAP1L4Q99733 375 aaKnown RBP11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 CCT7Q99832 543 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 PFDN4Q9NQP4 134 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 RBPJLQ9UBG7 517 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 ARPP21Q9UBL0 812 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 HEY2Q9UBP5 337 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 HESX1Q9UBX0 185 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 RAB26Q9ULW5 256 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 ARIH1Q9Y4X5 557 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 ZNF536O15090 1300 aa11.13□□□□□ -0.63
NIF3L1-204ENST00000409357 MINDY4BA8MYZ0 360 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 PDXKO00764 312 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 TNPO2O14787 897 aaKnown RBP11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 FAM155BO75949 473 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 TNFAIP8O95379 198 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 GNRH1P01148 92 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 ELNP15502 786 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 AMPD1P23109 780 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 GNA11P29992 359 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 HALP42357 657 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 FLT3LGP49771 235 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 NEK2P51955 445 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 CENPCQ03188 943 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 MSLNQ13421 630 aaPredicted RBP11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 Q3C1V9 767 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 RIPOR1Q6ZS17 1223 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 TRIM67Q6ZTA4 783 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 TMEM179Q6ZVK1 233 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 PPP1R14CQ8TAE6 165 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 PYROXD1Q8WU10 500 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 CDK5RAP3Q96JB5 506 aa11.12□□□□□ -0.63
NIF3L1-204ENST00000409357 PANX3Q96QZ0 392 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms