RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ART4Q93070 314 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 PURBQ96QR8 312 aaKnown RBP18.34■□□□□ 0.53
SMPD4-202ENST00000409031 AKT3Q9Y243 479 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 CPS1P31327 1500 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 CFAP99D6REC4 459 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 E9PBE3 544 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 KLHL41O60662 606 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 FCGR1AP12314 374 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 NPR1P16066 1061 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 SRPK1Q96SB4 655 aaKnown RBP18.34■□□□□ 0.53
SMPD4-202ENST00000409031 TMEM121Q9BTD3 319 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 POLR3FQ9H1D9 316 aaPredicted RBP18.34■□□□□ 0.53
SMPD4-202ENST00000409031 RUBCNLQ9H714 662 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 SMNDC1O75940 238 aaKnown RBP eCLIP18.34■□□□□ 0.53
SMPD4-202ENST00000409031 CAMTA2O94983 1202 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 TFE3P19532 575 aaPredicted RBP18.34■□□□□ 0.53
SMPD4-202ENST00000409031 ME2P23368 584 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 SMTNL2Q2TAL5 461 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 ETNPPLQ8TBG4 499 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 TRIM63Q969Q1 353 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 SLC35C1Q96A29 364 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 HES6Q96HZ4 224 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 M0QZ92 97 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 KLRC4O43908 158 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 EDF1O60869 148 aaKnown RBP18.34■□□□□ 0.53
SMPD4-202ENST00000409031 PROCP04070 461 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 PPM1FP49593 454 aaPredicted RBP18.34■□□□□ 0.53
SMPD4-202ENST00000409031 RBM44Q6ZP01 1051 aaKnown RBP18.34■□□□□ 0.53
SMPD4-202ENST00000409031 RIPOR1Q6ZS17 1223 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 TSPAN17Q96FV3 270 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 HACD3Q9P035 362 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 GABBR1Q9UBS5 961 aa18.34■□□□□ 0.53
SMPD4-202ENST00000409031 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.34■□□□□ 0.53
SMPD4-202ENST00000409031 NEXMIFQ5QGS0 1516 aa18.33■□□□□ 0.53
SMPD4-202ENST00000409031 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.53
SMPD4-202ENST00000409031 SERPINE1P05121 402 aa18.33■□□□□ 0.53
SMPD4-202ENST00000409031 ETS2P15036 469 aa18.33■□□□□ 0.53
SMPD4-202ENST00000409031 VCAM1P19320 739 aa18.33■□□□□ 0.53
SMPD4-202ENST00000409031 CA8P35219 290 aa18.33■□□□□ 0.53
SMPD4-202ENST00000409031 TNFAIP2Q03169 654 aa18.33■□□□□ 0.53
SMPD4-202ENST00000409031 ZNF568Q3ZCX4 644 aa18.33■□□□□ 0.53
SMPD4-202ENST00000409031 CCDC60Q8IWA6 550 aaPredicted RBP18.33■□□□□ 0.53
SMPD4-202ENST00000409031 POU5F2Q8N7G0 328 aa18.33■□□□□ 0.53
SMPD4-202ENST00000409031 VPS50Q96JG6 964 aa18.33■□□□□ 0.53
SMPD4-202ENST00000409031 MRPL4Q9BYD3 311 aaKnown RBP18.33■□□□□ 0.53
SMPD4-202ENST00000409031 CYLDQ9NQC7 956 aa18.33■□□□□ 0.53
SMPD4-202ENST00000409031 SLC12A6Q9UHW9 1150 aa18.33■□□□□ 0.53
SMPD4-202ENST00000409031 RWDD4Q6NW29 188 aaKnown RBP18.33■□□□□ 0.53
SMPD4-202ENST00000409031 MOXD1Q6UVY6 613 aa18.33■□□□□ 0.53
SMPD4-202ENST00000409031 TIMMDC1Q9NPL8 285 aa18.33■□□□□ 0.53
SMPD4-202ENST00000409031 A8MUI8 341 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 CPA3P15088 417 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 FECHP22830 423 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 ALDH1A3P47895 512 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 DCAF15Q66K64 600 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 OLFML1Q6UWY5 402 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 SPOCD1Q6ZMY3 1216 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 PRELID2Q8N945 189 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 OR6P1Q8NGX9 317 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 JMJD4Q9H9V9 463 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 TCF7L2Q9NQB0 619 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.33■□□□□ 0.52
SMPD4-202ENST00000409031 ZC3H11AO75152 810 aaKnown RBP eCLIP18.33■□□□□ 0.52
SMPD4-202ENST00000409031 MED24O75448 989 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 CYP19A1P11511 503 aaPredicted RBP18.33■□□□□ 0.52
SMPD4-202ENST00000409031 KCNA2P16389 499 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 ZNF23P17027 643 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 IMPG1Q17R60 797 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 RGS21Q2M5E4 152 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 C16orf86Q6ZW13 317 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 FITM2Q8N6M3 262 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 WNK4Q96J92 1243 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 NLRP4Q96MN2 994 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 EBF2Q9HAK2 575 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 PCDHA10Q9Y5I2 948 aa18.33■□□□□ 0.52
SMPD4-202ENST00000409031 F8W8V4 182 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 ASNA1O43681 348 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 SGSM1Q2NKQ1 1148 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 HSD3B7Q9H2F3 369 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 CPSF3Q9UKF6 684 aaKnown RBP18.32■□□□□ 0.52
SMPD4-202ENST00000409031 VIL1P09327 827 aaKnown RBP18.32■□□□□ 0.52
SMPD4-202ENST00000409031 BOLA3Q53S33 107 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 TRIM74Q86UV6 250 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 TRIM73Q86UV7 250 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 P3H2Q8IVL5 708 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 TSPAN14Q8NG11 270 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 COG4Q9H9E3 785 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 HMG20AQ9NP66 347 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 KDM6AO15550 1401 aaPredicted RBP18.32■□□□□ 0.52
SMPD4-202ENST00000409031 PSMD3O43242 534 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 SSTR1P30872 391 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 RPL10AP62906 217 aaKnown RBP18.32■□□□□ 0.52
SMPD4-202ENST00000409031 C1orf50Q9BV19 199 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 RUSC1Q9BVN2 902 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 TEKT2Q9UIF3 430 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 C3orf70A6NLC5 250 aaPredicted RBP18.32■□□□□ 0.52
SMPD4-202ENST00000409031 MEI4A8MW99 385 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 DGAT1O75907 488 aa18.32■□□□□ 0.52
SMPD4-202ENST00000409031 NSUN2Q08J23 767 aaKnown RBP eCLIP18.32■□□□□ 0.52
SMPD4-202ENST00000409031 STILQ15468 1287 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms