RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 C12orf29Q8N999 325 aa10.87□□□□□ -0.67
SNORD88C-201ENST00000408061 UBA3Q8TBC4 463 aa10.87□□□□□ -0.67
SNORD88C-201ENST00000408061 LINC01599Q8WXQ3 324 aa10.87□□□□□ -0.67
SNORD88C-201ENST00000408061 RNPC3Q96LT9 517 aaKnown RBP10.87□□□□□ -0.67
SNORD88C-201ENST00000408061 SYT15Q9BQS2 421 aa10.87□□□□□ -0.67
SNORD88C-201ENST00000408061 CNPY3Q9BT09 278 aa10.87□□□□□ -0.67
SNORD88C-201ENST00000408061 TRIM62Q9BVG3 475 aa10.87□□□□□ -0.67
SNORD88C-201ENST00000408061 C11orf49Q9H6J7 331 aa10.87□□□□□ -0.67
SNORD88C-201ENST00000408061 CYTH4Q9UIA0 394 aa10.87□□□□□ -0.67
SNORD88C-201ENST00000408061 PACSIN2Q9UNF0 486 aaPredicted RBP10.87□□□□□ -0.67
SNORD88C-201ENST00000408061 INPP5FQ9Y2H2 1132 aa10.87□□□□□ -0.67
SNORD88C-201ENST00000408061 CASTOR2A6NHX0 329 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 TMEM110-MUSTN1A8MSY1 372 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 KRIT1O00522 736 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 DPYSL4O14531 572 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 FSCN2O14926 492 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 OAZ2O95190 189 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 CLTBP09497 229 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 FAM200BP0CF97 657 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 H2AFXP16104 143 aaPredicted RBP10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 NPR3P17342 541 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 PTPN7P35236 360 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 RFC1P35251 1148 aaPredicted RBP10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 AFF1P51825 1210 aaKnown RBP10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 ZNF143P52747 638 aaPredicted RBP10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 TSPY1Q01534 308 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 ELF2Q15723 593 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 LONRF2Q1L5Z9 754 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 MAP9Q49MG5 647 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 ODF2Q5BJF6 829 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 CLLU1OSQ5K130 101 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 OR6B2Q6IFH4 312 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 PMF1Q6P1K2 205 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 C4orf50Q6ZRC1 276 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 SLC26A9Q7LBE3 791 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 OSTM1Q86WC4 334 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 VSIG1Q86XK7 387 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 DCP1BQ8IZD4 617 aaKnown RBP10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 FUKQ8N0W3 1084 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 SLC2A14Q8TDB8 520 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 MCEEQ96PE7 176 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 PSMB7Q99436 277 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 PRDM16Q9HAZ2 1276 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 CSNK1G1Q9HCP0 422 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 ST7Q9NRC1 585 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 RNF19AQ9NV58 838 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 TMEM39AQ9NV64 488 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 TBC1D13Q9NVG8 400 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 RRN3Q9NYV6 651 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 NME7Q9Y5B8 376 aa10.86□□□□□ -0.67
SNORD88C-201ENST00000408061 E5RJQ4 531 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 KIAA0355O15063 1070 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 TADA2AO75478 443 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 FGGP02679 453 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 GPD1P21695 349 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 PSMA2P25787 234 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 TNFRSF8P28908 595 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 CHRNA3P32297 505 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 PTPN9P43378 593 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 ATN1P54259 1190 aaPredicted RBP10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 RPL7AP62424 266 aaKnown RBP10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 YWHAHQ04917 246 aaPredicted RBP10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 ORC1Q13415 861 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 DHX34Q14147 1143 aaKnown RBP10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 NFE2Q16621 373 aaPredicted RBP10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 TRIM60Q495X7 471 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 BOLA3Q53S33 107 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 INTS6LQ5JSJ4 861 aaKnown RBP10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 FAM102AQ5T9C2 384 aaPredicted RBP10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 OVOS1Q6IE37 1185 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 C8orf74Q6P047 294 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 CD300LGQ6UXG3 332 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 BEND5Q7L4P6 421 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 SLC13A5Q86YT5 568 aaPredicted RBP10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 IFT20Q8IY31 132 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 NOA1Q8NC60 698 aaKnown RBP10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 C3orf58Q8NDZ4 430 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 IRGQQ8WZA9 623 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 ALG3Q92685 438 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 SMARCD1Q96GM5 515 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 FUBP3Q96I24 572 aaKnown RBP eCLIP10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 CASD1Q96PB1 797 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 TBCBQ99426 244 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 PARD6BQ9BYG5 372 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 FRMD8P1Q9BZ68 369 aaPredicted RBP10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 GOLPH3Q9H4A6 298 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 CNGB3Q9NQW8 809 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 FAM49BQ9NUQ9 324 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 STK39Q9UEW8 545 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 FAN1Q9Y2M0 1017 aa10.85□□□□□ -0.67
SNORD88C-201ENST00000408061 FAM187AA6NFU0 413 aa10.84□□□□□ -0.67
SNORD88C-201ENST00000408061 OR6C75A6NL08 312 aa10.84□□□□□ -0.67
SNORD88C-201ENST00000408061 C2CD4BA6NLJ0 364 aa10.84□□□□□ -0.67
SNORD88C-201ENST00000408061 ZNF487B1APH4 448 aa10.84□□□□□ -0.67
SNORD88C-201ENST00000408061 GOLGA8SH3BPF8 625 aa10.84□□□□□ -0.67
SNORD88C-201ENST00000408061 H7C4K7 107 aa10.84□□□□□ -0.67
SNORD88C-201ENST00000408061 DDHD2O94830 711 aa10.84□□□□□ -0.67
SNORD88C-201ENST00000408061 TIMP1P01033 207 aa10.84□□□□□ -0.67
SNORD88C-201ENST00000408061 PYGMP11217 842 aa10.84□□□□□ -0.67
SNORD88C-201ENST00000408061 PDGFRAP16234 1089 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms