RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 EXOSC10Q01780 885 aaKnown RBP8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 RHAGQ02094 409 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 STX5Q13190 355 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 ITIH4Q14624 930 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 EIF2S3LQ2VIR3 472 aaKnown RBP8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 GATAD2AQ86YP4 633 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 IPMKQ8NFU5 416 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 KIF12Q96FN5 646 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 C9orf72Q96LT7 481 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 CCDC17Q96LX7 622 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 FKBP14Q9NWM8 211 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 COMMD8Q9NX08 183 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 HEATR9A2RTY3 570 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 FAM25EA8MYX2 175 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 CYP26A1O43174 497 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 ALDH1A1P00352 501 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 MAGEA4P43358 317 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 PSMD4P55036 377 aaKnown RBP8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 GRSF1Q12849 480 aaKnown RBP eCLIP8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 ORC2Q13416 577 aaPredicted RBP8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 PTGISQ16647 500 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 PYDC2Q56P42 97 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 SPANXN2Q5MJ10 180 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 LMBRD2Q68DH5 695 aaPredicted RBP8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 NUDT18Q6ZVK8 323 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 GLYCTKQ8IVS8 523 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 ZIM3Q96PE6 472 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 MCEEQ96PE7 176 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 POLR3FQ9H1D9 316 aaPredicted RBP8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 DKK3Q9UBP4 350 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 ATP10DQ9P241 1426 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 USP17L3A6NCW0 530 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 USP17L4A6NCW7 530 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 THRAP10827 490 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 PPIDQ08752 370 aaKnown RBP8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 TWF1Q12792 350 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 DNAJC3Q13217 504 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 RNF19BQ6ZMZ0 732 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 USP17L1Q7RTZ2 530 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 ZNF438Q7Z4V0 828 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 TRIM48Q8IWZ4 208 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 ZNF671Q8TAW3 534 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 ZNF333Q96JL9 665 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 PNKPQ96T60 521 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 SLC35C2Q9NQQ7 365 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 CDH16O75309 829 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 ATP6V1G2O95670 118 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 MYL12AP19105 171 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 SCTRP47872 440 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 SEC24CP53992 1094 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 GEMIN4P57678 1058 aaKnown RBP8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 POU5F1Q01860 360 aaKnown RBP8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 VAC14Q08AM6 782 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 MTFR1Q15390 333 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 TMEM63BQ5T3F8 832 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 UGT3A1Q6NUS8 523 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 MIGA2Q7L4E1 593 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 AIFM3Q96NN9 605 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 FAM192AQ9GZU8 254 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 VCPKMTQ9H867 229 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 PHF11Q9UIL8 331 aa8.17□□□□□ -1.1
RBFOX2-205ENST00000405409 ZNF804BA4D1E1 1349 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 EMSYQ7Z589 1322 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 PNMA8CA0A1B0GUJ8 204 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 PAX7P23759 505 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 HNMTP50135 292 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 ARHGDIBP52566 201 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 PADI6Q6TGC4 694 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 CASP12Q6UXS9 341 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 PPP2R3CQ969Q6 453 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 DYNLL2Q96FJ2 89 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 S100A13Q99584 98 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 MRPL4Q9BYD3 311 aaKnown RBP8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 GPR63Q9BZJ6 419 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 TMEM117Q9H0C3 514 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 ZNF302Q9NR11 478 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 MAP3K20Q9NYL2 800 aaKnown RBP8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 LIMA1Q9UHB6 759 aaKnown RBP8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 ADGRG1Q9Y653 693 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 POTEMA6NI47 508 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 FAM220BPB1ANY3 271 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 MYL12BO14950 172 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 SOAT2O75908 522 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 CEBPGP53567 150 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 PTK6Q13882 451 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 TAF13Q15543 124 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 ZMYM1Q5SVZ6 1142 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 TIGD7Q6NT04 549 aaPredicted RBP8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 ZBTB49Q6ZSB9 765 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 OOSP2Q86WS3 158 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 EID3Q8N140 333 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 EAF2Q96CJ1 260 aaPredicted RBP8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 PABPC5Q96DU9 382 aaKnown RBP8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 CAMKK2Q96RR4 588 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 CD209Q9NNX6 404 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 PPIEQ9UNP9 301 aaKnown RBP8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 ZBTB1Q9Y2K1 713 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 PLEKHA8P1O95397 391 aa8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 PTPN1P18031 435 aaKnown RBP8.16□□□□□ -1.1
RBFOX2-205ENST00000405409 PBLDP30039 288 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms