RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PDGFRBP09619 1106 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 CTAGE8P0CG41 777 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 PDCLQ13371 301 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 MAMLD1Q13495 774 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 PPP1R26Q5T8A7 1209 aaPredicted RBP22.18■■□□□ 1.14
TPM1-208ENST00000404484 CCDC181Q5TID7 509 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 CTAGE6Q86UF2 777 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 CTAGE4Q8IX94 777 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 B3GALNT2Q8NCR0 500 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 C3orf20Q8ND61 904 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 ARNTL2Q8WYA1 636 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 C18orf8Q96DM3 657 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 GOLPH3Q9H4A6 298 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 TBC1D13Q9NVG8 400 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 CACNG4Q9UBN1 327 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 NME7Q9Y5B8 376 aa22.18■■□□□ 1.14
TPM1-208ENST00000404484 TMEM189-UBE2V1I3L0A0 370 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 SRGAP2O75044 1071 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 CYP11A1P05108 521 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 LMO2P25791 158 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 PCSK1P29120 753 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 SLC1A1P43005 524 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 PAFAH1B1P43034 410 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 BCAT1P54687 386 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 ADGRE1Q14246 886 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 PTPN20Q4JDL3 420 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 TIGD5Q53EQ6 642 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 OSTM1Q86WC4 334 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 UBL4BQ8N7F7 174 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 FEZF2Q8TBJ5 459 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 STK32AQ8WU08 396 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 PAAF1Q9BRP4 392 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 SELENOOQ9BVL4 669 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 MRPL9Q9BYD2 267 aaKnown RBP22.17■■□□□ 1.14
TPM1-208ENST00000404484 DPEP3Q9H4B8 488 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 FAM49BQ9NUQ9 324 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 DDX43Q9NXZ2 648 aaKnown RBP22.17■■□□□ 1.14
TPM1-208ENST00000404484 CHORDC1Q9UHD1 332 aaPredicted RBP22.17■■□□□ 1.14
TPM1-208ENST00000404484 MTUS1Q9ULD2 1270 aa22.17■■□□□ 1.14
TPM1-208ENST00000404484 TMEM110-MUSTN1A8MSY1 372 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 M0QZQ0 153 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 KCNK3O14649 394 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 SPOPO43791 374 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 TADA3O75528 432 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 GABRB2P47870 512 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 ERVK-21P61565 698 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 ZNF268Q14587 947 aaPredicted RBP22.16■■□□□ 1.14
TPM1-208ENST00000404484 CFAP221Q4G0U5 840 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 GOLGA1Q92805 767 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 CAPZA3Q96KX2 299 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 TGS1Q96RS0 853 aaKnown RBP22.16■■□□□ 1.14
TPM1-208ENST00000404484 PACSIN2Q9UNF0 486 aaPredicted RBP22.16■■□□□ 1.14
TPM1-208ENST00000404484 TRANK1O15050 2925 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 FOSL2P15408 326 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 MAN1A1P33908 653 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 GATMP50440 423 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 SLC8A3P57103 927 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 PSMC1P62191 440 aaKnown RBP22.16■■□□□ 1.14
TPM1-208ENST00000404484 PKDCCQ504Y2 493 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 C2CD6Q53TS8 623 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 COLGALT2Q8IYK4 626 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 ANKRD52Q8NB46 1076 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.16■■□□□ 1.14
TPM1-208ENST00000404484 UBA3Q8TBC4 463 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 SUSD3Q96L08 255 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 CPXM1Q96SM3 734 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 C17orf80Q9BSJ5 609 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 CYLDQ9NQC7 956 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 IP6K2Q9UHH9 426 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 CYTH4Q9UIA0 394 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 CDH9Q9ULB4 789 aa22.16■■□□□ 1.14
TPM1-208ENST00000404484 TRAPPC3O43617 180 aa22.15■■□□□ 1.14
TPM1-208ENST00000404484 PROSCO94903 275 aa22.15■■□□□ 1.14
TPM1-208ENST00000404484 PTPN1P18031 435 aaKnown RBP22.15■■□□□ 1.14
TPM1-208ENST00000404484 TYMPP19971 482 aa22.15■■□□□ 1.14
TPM1-208ENST00000404484 COMTP21964 271 aa22.15■■□□□ 1.14
TPM1-208ENST00000404484 DNA2P51530 1060 aa22.15■■□□□ 1.14
TPM1-208ENST00000404484 BST2Q10589 180 aaKnown RBP22.15■■□□□ 1.14
TPM1-208ENST00000404484 DCUN1D2Q6PH85 259 aa22.15■■□□□ 1.14
TPM1-208ENST00000404484 CREG2Q8IUH2 290 aa22.15■■□□□ 1.14
TPM1-208ENST00000404484 COG1Q8WTW3 980 aa22.15■■□□□ 1.14
TPM1-208ENST00000404484 PSMB7Q99436 277 aa22.15■■□□□ 1.14
TPM1-208ENST00000404484 GAS2L1Q99501 681 aaPredicted RBP22.15■■□□□ 1.14
TPM1-208ENST00000404484 HNRNPABQ99729 332 aaKnown RBP22.15■■□□□ 1.14
TPM1-208ENST00000404484 SYT15Q9BQS2 421 aa22.15■■□□□ 1.14
TPM1-208ENST00000404484 TCRBV5S1A1TA0A578 114 aa22.14■■□□□ 1.13
TPM1-208ENST00000404484 CCDC66A2RUB6 948 aa22.14■■□□□ 1.13
TPM1-208ENST00000404484 ZNF185O15231 689 aa22.14■■□□□ 1.13
TPM1-208ENST00000404484 CXCR5P32302 372 aa22.14■■□□□ 1.13
TPM1-208ENST00000404484 BTG3Q14201 252 aaPredicted RBP22.14■■□□□ 1.13
TPM1-208ENST00000404484 ZNF572Q7Z3I7 529 aaPredicted RBP22.14■■□□□ 1.13
TPM1-208ENST00000404484 PHLDB2Q86SQ0 1253 aa22.14■■□□□ 1.13
TPM1-208ENST00000404484 TTC30AQ86WT1 665 aa22.14■■□□□ 1.13
TPM1-208ENST00000404484 FIBCD1Q8N539 461 aa22.14■■□□□ 1.13
TPM1-208ENST00000404484 UBXN4Q92575 508 aa22.14■■□□□ 1.13
TPM1-208ENST00000404484 CASD1Q96PB1 797 aa22.14■■□□□ 1.13
TPM1-208ENST00000404484 CARD9Q9H257 536 aa22.14■■□□□ 1.13
TPM1-208ENST00000404484 ST7Q9NRC1 585 aa22.14■■□□□ 1.13
TPM1-208ENST00000404484 PCDHB8Q9UN66 801 aa22.14■■□□□ 1.13
TPM1-208ENST00000404484 DYNC1I1O14576 645 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms