RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 SMTNL2Q2TAL5 461 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 NEK10Q6ZWH5 1172 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 ZNF677Q86XU0 584 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 FAM45AQ8TCE6 357 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 CCDC126Q96EE4 140 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 MAGEB10Q96LZ2 347 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 EPS8L2Q9H6S3 715 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 MRPL39Q9NYK5 338 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 PADI4Q9UM07 663 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 TMEM120BA0PK00 339 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 EXTL3O43909 919 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 ASS1P00966 412 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 FAM45BPQ6NSW5 357 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 ILKAPQ9H0C8 392 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 AVENQ9NQS1 362 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 IL1RAPL1Q9NZN1 696 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 NCF1BA6NI72 391 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 NCF1CA8MVU1 366 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 NCF1P14598 390 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 FNTAP49354 379 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 SERPINB8P50452 374 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 NUP107P57740 925 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 TGM3Q08188 693 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 MYO1HQ8N1T3 1032 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 FAM71DQ8N9W8 422 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 ARMC7Q9H6L4 198 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 RGS18Q9NS28 235 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 NARFQ9UHQ1 456 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 LINC00854A0A1B0GVQ3 168 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 ENO4A6NNW6 628 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 NPTXRO95502 500 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 ATP6V1B1P15313 513 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 SNRPFP62306 86 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 CSNK2BP67870 215 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 TMEM132BQ14DG7 1078 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 FBXW10Q5XX13 1052 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 FAM9CQ8IZT9 166 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 GTF3C2Q8WUA4 911 aaPredicted RBP12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 REEP2Q9BRK0 252 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 PHACTR1Q9C0D0 580 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 KCTD10Q9H3F6 313 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 VTA1Q9NP79 307 aa12.76□□□□□ -0.37
CACNA1C-219ENST00000399649 MAGEA13PA6NCF6 341 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 RNASEH1O60930 286 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 MYBP10242 640 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 GTF2H1P32780 548 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 FLT3P36888 993 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 SERPINB5P36952 375 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 CPT1AP50416 773 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 CHRNB3Q05901 458 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 SNAPC2Q13487 334 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 CCDC144BQ3MJ40 725 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 MRNIPQ6NTE8 343 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 ZCCHC8Q6NZY4 707 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 SRLQ86TD4 932 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 FAM118BQ9BPY3 351 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 EMILIN2Q9BXX0 1053 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 WDCPQ9H6R7 721 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 FANCEQ9HB96 536 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 SLC2A3P11169 496 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 ITGAXP20702 1163 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 NAB2Q15742 525 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 GPAT2Q6NUI2 795 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 SH2D3CQ8N5H7 860 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 MOSPD2Q8NHP6 518 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 TMEM8AQ9HCN3 771 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 INTS13Q9NVM9 706 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 CYP19A1P11511 503 aaPredicted RBP12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 PNPLA4P41247 253 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 EN1Q05925 392 aaPredicted RBP12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 TAF1CQ15572 869 aaPredicted RBP12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 JAMLQ86YT9 394 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 KIF2BQ8N4N8 673 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 RNASE11Q8TAA1 199 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 FEZF2Q8TBJ5 459 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 BLOC1S5Q8TDH9 187 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 SEPT1Q8WYJ6 367 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 ITIH6Q6UXX5 1313 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 F5H5T6 163 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 PEX1O43933 1283 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 MRPS35P82673 323 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 DDX39BQ13838 428 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 ADRM1Q16186 407 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 EDRF1Q3B7T1 1238 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 CYP4A22Q5TCH4 519 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 TIGD7Q6NT04 549 aaPredicted RBP12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 ADI1Q9BV57 179 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 NFKBIZQ9BYH8 718 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 GLRA3O75311 464 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 HLA-DRAP01903 254 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 CPA2P48052 419 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 PLIN5Q00G26 463 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 ALX1Q15699 326 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 EFCAB12Q6NXP0 572 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 NOTUMQ6P988 496 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 SHC4Q6S5L8 630 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 COMMD2Q86X83 199 aa12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 WDR36Q8NI36 951 aaKnown RBP12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 KLF6Q99612 283 aaPredicted RBP12.75□□□□□ -0.37
CACNA1C-219ENST00000399649 AAR2Q9Y312 384 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms