RNA–Protein interactions for RNA: ENST00000399644.5

CACNA1C-218, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-218	ENST00000399644	ITIH5	Q86UX2	942 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TTC39C	Q8N584	583 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CNDP1	Q96KN2	507 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TNKS2	Q9H2K2	1166 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	DHX35	Q9H5Z1	703 aa	Known RBP	11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CAB39L	Q9H9S4	337 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TMEM138	Q9NPI0	162 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CLIC4	Q9Y696	253 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	UTY	O14607	1347 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PSIP1	O75475	530 aa	Known RBP	11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TNFRSF21	O75509	655 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	OR6A2	O95222	327 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CCDC166	P0CW27	439 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SULT1E1	P49888	294 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SCNN1B	P51168	640 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	EPS8	Q12929	822 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PLD1	Q13393	1074 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	FAM172A	Q8WUF8	416 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	LPAR1	Q92633	364 aa		11.55	□□□□□ -0.56
CACNA1C-218	ENST00000399644	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	HSD3B1	P14060	373 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CLK2	P49760	499 aa	Known RBP	11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SESN2	P58004	480 aa	Predicted RBP	11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ROR1	Q01973	937 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	BAAT	Q14032	418 aa	Predicted RBP	11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PROSER3	Q2NL68	480 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PLEKHA7	Q6IQ23	1121 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	NECAB2	Q7Z6G3	386 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TRPC4AP	Q8TEL6	797 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	L1RE1	Q9UN81	338 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	HSD17B4	P51659	736 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CCR4	P51679	360 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	KCTD21	Q4G0X4	260 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	HEATR6	Q6AI08	1181 aa	Known RBP	11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CNST	Q6PJW8	725 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ERO1B	Q86YB8	467 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	C7orf61	Q8IZ16	206 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ANKFN1	Q8N957	763 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	COPS7B	Q9H9Q2	264 aa	Predicted RBP	11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CHST12	Q9NRB3	414 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SHOC2	Q9UQ13	582 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TAF4	O00268	1085 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ZNF432	O94892	652 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	IL6	P05231	212 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ERCC2	P18074	760 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	NUDT2	P50583	147 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SRL	Q86TD4	932 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CENPL	Q8N0S6	344 aa	Predicted RBP	11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	UBXN6	Q9BZV1	441 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	VTA1	Q9NP79	307 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CRB1	P82279	1406 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PDHX	O00330	501 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CD4	P01730	458 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PRDX5	P30044	214 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ADCY2	Q08462	1091 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ARSH	Q5FYA8	562 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SETD6	Q8TBK2	473 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	STOML1	Q9UBI4	398 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	NRBP1	Q9UHY1	535 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	BTBD18	B2RXH4	712 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	P4HB	P07237	508 aa	Known RBP	11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ALOX12	P18054	663 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	FGFR4	P22455	802 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TALDO1	P37837	337 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ALDH9A1	P49189	494 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ITGB3BP	Q13352	177 aa	Predicted RBP	11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	NCF4	Q15080	339 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SV2C	Q496J9	727 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	DHRS1	Q96LJ7	313 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CLCC1	Q96S66	551 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PHACTR1	Q9C0D0	580 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	KIAA0556	O60303	1618 aa		11.54	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ARL5C	A6NH57	179 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TSPAN1	O60635	241 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	S100A6	P06703	90 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CPA2	P48052	419 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ARHGDIB	P52566	201 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	OTUD4	Q01804	1114 aa	Known RBP	11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	VAC14	Q08AM6	782 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	MTM1	Q13496	603 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SMU1	Q2TAY7	513 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SULT1C3	Q6IMI6	304 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TBC1D16	Q8TBP0	767 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SEPT1	Q8WYJ6	367 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	EMILIN3	Q9NT22	766 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SLC39A10	Q9ULF5	831 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CYP2D6	P10635	497 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CTSE	P14091	401 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	RRM2	P31350	389 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	SARS	P49591	514 aa	Known RBP	11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	NCKAP1L	P55160	1127 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	TTC33	Q6PID6	262 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CCDC51	Q96ER9	411 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	RPS6KA6	Q9UK32	745 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	KRT38	O76015	456 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	ZNF682	O95780	498 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	PLA2G4A	P47712	749 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	EFNA5	P52803	228 aa		11.53	□□□□□ -0.56
CACNA1C-218	ENST00000399644	CNTN1	Q12860	1018 aa		11.53	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms