RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 SLC39A10Q9ULF5 831 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 ARHGAP26Q9UNA1 814 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 PCDHGC5Q9Y5F6 944 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 V9GYQ6 96 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 SNX2O60749 519 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 PROSCO94903 275 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 SLITRK3O94933 977 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 ITGB3P05106 788 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 GFAPP14136 432 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 BGNP21810 368 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 MARCKSL1P49006 195 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 DYNC1I2Q13409 638 aaKnown RBP11.21□□□□□ -0.62
CCDC40-204ENST00000397545 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.21□□□□□ -0.62
CCDC40-204ENST00000397545 IFT43Q96FT9 208 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 APOL2Q9BQE5 337 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 IKZF4Q9H2S9 585 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 ANKEF1Q9NU02 776 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 FAM198AQ9UFP1 575 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 GRID1Q9ULK0 1009 aa11.21□□□□□ -0.62
CCDC40-204ENST00000397545 KIAA1551Q9HCM1 1747 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 CASZ1Q86V15 1759 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 A0A0A6YYK5 440 aaPredicted RBP11.2□□□□□ -0.62
CCDC40-204ENST00000397545 AKAP10O43572 662 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 DDNO94850 711 aaPredicted RBP11.2□□□□□ -0.62
CCDC40-204ENST00000397545 ZSCAN5DPP0CG00 497 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 PYGBP11216 843 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 HADHAP40939 763 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 SKOR1P84550 965 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 PCSK7Q16549 785 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 GLRA4Q5JXX5 417 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 ATF7IP2Q5U623 682 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 C9orf131Q5VYM1 1079 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 NAIF1Q69YI7 327 aaPredicted RBP11.2□□□□□ -0.62
CCDC40-204ENST00000397545 ITPRIPL1Q6GPH6 555 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 LPAR1Q92633 364 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 HAS1Q92839 578 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 KCNK16Q96T55 309 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 NT5C1AQ9BXI3 368 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 ZCWPW1Q9H0M4 648 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 PIH1D1Q9NWS0 290 aaKnown RBP11.2□□□□□ -0.62
CCDC40-204ENST00000397545 ZNRF3Q9ULT6 936 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 PIN4Q9Y237 131 aaKnown RBP11.2□□□□□ -0.62
CCDC40-204ENST00000397545 DNAJC8O75937 253 aaPredicted RBP11.2□□□□□ -0.62
CCDC40-204ENST00000397545 YY1P25490 414 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 GMPSP49915 693 aaPredicted RBP11.2□□□□□ -0.62
CCDC40-204ENST00000397545 C6orf10Q5SRN2 563 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 OLFML2BQ68BL8 750 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 ISLR2Q6UXK2 745 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 C3orf20Q8ND61 904 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 GIPC2Q8TF65 315 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 BAP1Q92560 729 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 PWWP2AQ96N64 755 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 GPBP1L1Q9HC44 474 aaPredicted RBP11.2□□□□□ -0.62
CCDC40-204ENST00000397545 OLFML3Q9NRN5 406 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 OPLAHO14841 1288 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 STMN1P16949 149 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 GPD1P21695 349 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 ALDH5A1P51649 535 aaPredicted RBP11.2□□□□□ -0.62
CCDC40-204ENST00000397545 AQP5P55064 265 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 PKN2Q16513 984 aaKnown RBP11.2□□□□□ -0.62
CCDC40-204ENST00000397545 TFDP3Q5H9I0 405 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 ANGEL2Q5VTE6 544 aaKnown RBP11.2□□□□□ -0.62
CCDC40-204ENST00000397545 ARHGAP18Q8N392 663 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 RFWD2Q8NHY2 731 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 THAP11Q96EK4 314 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 FAM84AQ96KN4 292 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 ARMCX1Q9P291 453 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 RPS6KL1Q9Y6S9 549 aa11.2□□□□□ -0.62
CCDC40-204ENST00000397545 C3orf70A6NLC5 250 aaPredicted RBP11.19□□□□□ -0.62
CCDC40-204ENST00000397545 PECAM1P16284 738 aaPredicted RBP11.19□□□□□ -0.62
CCDC40-204ENST00000397545 MYL6P60660 151 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 TMEM119Q4V9L6 283 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 TTC39BQ5VTQ0 682 aaPredicted RBP11.19□□□□□ -0.62
CCDC40-204ENST00000397545 FRA10AC1Q70Z53 315 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 PRUNE1Q86TP1 453 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 ZNF677Q86XU0 584 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 ULK4Q96C45 1275 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 HPDLQ96IR7 371 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 STX18Q9P2W9 335 aaKnown RBP11.19□□□□□ -0.62
CCDC40-204ENST00000397545 IGKV6D-41A0A0C4DH26 115 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 KIAA0391O15091 583 aaKnown RBP11.19□□□□□ -0.62
CCDC40-204ENST00000397545 SNHG28P0DPA3 235 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 EPHB2P29323 1055 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 MTHFD1LQ6UB35 978 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 SH3BP5LQ7L8J4 393 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 NOP9Q86U38 636 aaKnown RBP11.19□□□□□ -0.62
CCDC40-204ENST00000397545 ZNF280CQ8ND82 737 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 PTPRN2Q92932 1015 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 PABPC5Q96DU9 382 aaKnown RBP11.19□□□□□ -0.62
CCDC40-204ENST00000397545 CMTM5Q96DZ9 223 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 ZDHHC15Q96MV8 337 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 ZBTB18Q99592 522 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 FGFBP2Q9BYJ0 223 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 OLA1Q9NTK5 396 aaKnown RBP11.19□□□□□ -0.62
CCDC40-204ENST00000397545 NAV1Q8NEY1 1877 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 TYW5A2RUC4 315 aaKnown RBP11.19□□□□□ -0.62
CCDC40-204ENST00000397545 SLC26A4O43511 780 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 KLHL2O95198 593 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 KCNA2P16389 499 aa11.19□□□□□ -0.62
CCDC40-204ENST00000397545 PAX7P23759 505 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms