RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ME3Q16798 604 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 MAP7D1Q3KQU3 841 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 PLEKHG6Q3KR16 790 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 SEZ6Q53EL9 994 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 TMEM92Q6UXU6 159 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 DSTYKQ6XUX3 929 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 C1orf186Q6ZWK4 172 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 TMEM130Q8N3G9 435 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 MAB21L3Q8N8X9 362 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 HMGB4Q8WW32 186 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 SPIRE2Q8WWL2 714 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 USP13Q92995 863 aaPredicted RBP10.19□□□□□ -0.78
NEDD9-203ENST00000397378 LPIN3Q9BQK8 851 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 TIPINQ9BVW5 301 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 KIF9Q9HAQ2 790 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 LRWD1Q9UFC0 647 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 DNMT3LQ9UJW3 386 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 DNM3Q9UQ16 869 aa10.19□□□□□ -0.78
NEDD9-203ENST00000397378 ANTXRLA6NF34 631 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 CBFA2T3O75081 653 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 ADRB2P07550 413 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 ODC1P11926 461 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 HLA-EP13747 358 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 HNRNPLP14866 589 aaKnown RBP eCLIP10.18□□□□□ -0.783e-16■□□□□ 8.9
NEDD9-203ENST00000397378 GUCY2CP25092 1073 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 EIF2S3P41091 472 aaKnown RBP10.18□□□□□ -0.78
NEDD9-203ENST00000397378 IFNAR2P48551 515 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 FOSBP53539 338 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 ANAPC15P60006 121 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 PPP2R3AQ06190 1150 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 SPAG1Q07617 926 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 SMARCB1Q12824 385 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 KYAT1Q16773 422 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 SPATA1Q5VX52 437 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 RINT1Q6NUQ1 792 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 PCSK4Q6UW60 755 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 RGL4Q8IZJ4 473 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 C4orf32Q8N8J7 132 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 IGSF22Q8N9C0 903 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 TMEM161BQ8NDZ6 487 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 OR10T2Q8NGX3 314 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 RIN3Q8TB24 985 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 SNX29Q8TEQ0 813 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 C2orf15Q8WU43 125 aaKnown RBP10.18□□□□□ -0.78
NEDD9-203ENST00000397378 KCNN1Q92952 543 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 SENP8Q96LD8 212 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 SEPT5Q99719 369 aaPredicted RBP10.18□□□□□ -0.78
NEDD9-203ENST00000397378 RUSC1Q9BVN2 902 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 RAB34Q9BZG1 259 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 HAPLN2Q9GZV7 340 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 ZCWPW1Q9H0M4 648 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 FOXP1Q9H334 677 aaPredicted RBP10.18□□□□□ -0.78
NEDD9-203ENST00000397378 PRDM16Q9HAZ2 1276 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 TDP1Q9NUW8 608 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 DUS2Q9NX74 493 aaKnown RBP10.18□□□□□ -0.78
NEDD9-203ENST00000397378 MYOFQ9NZM1 2061 aa10.18□□□□□ -0.78
NEDD9-203ENST00000397378 COL5A1P20908 1838 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-203ENST00000397378 SFI1A8K8P3 1242 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 LACTBL1A8MY62 500 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 E9PMD0 336 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 K7EQS6 105 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 ERVH48-1M5A8F1 160 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 SLC28A2O43868 658 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 JAK2O60674 1132 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 F11P03951 625 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 ATXN1LP0C7T5 689 aaKnown RBP10.17□□□□□ -0.78
NEDD9-203ENST00000397378 MAPTP10636 758 aaKnown RBP10.17□□□□□ -0.78
NEDD9-203ENST00000397378 NMT1P30419 496 aaKnown RBP10.17□□□□□ -0.78
NEDD9-203ENST00000397378 TRAPPC10P48553 1259 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 SMTNP53814 917 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 NLRP12P59046 1061 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 SEMG2Q02383 582 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 NR1H3Q13133 447 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 ZNF268Q14587 947 aaPredicted RBP10.17□□□□□ -0.78
NEDD9-203ENST00000397378 MTF1Q14872 753 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 MGAT5BQ3V5L5 792 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 SLC39A12Q504Y0 691 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 CCDC157Q569K6 752 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 TTC38Q5R3I4 469 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 SLC36A4Q6YBV0 504 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 TMEM150AQ86TG1 271 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 ALLCQ8N6M5 410 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 TXNDC5Q8NBS9 432 aaKnown RBP10.17□□□□□ -0.78
NEDD9-203ENST00000397378 SPPL2BQ8TCT7 592 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 ATP2A3Q93084 1043 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 NXPE2Q96DL1 559 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 TOR4AQ9NXH8 423 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 DSEQ9UL01 958 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 WNT6Q9Y6F9 365 aa10.17□□□□□ -0.78
NEDD9-203ENST00000397378 GOLGA4Q13439 2230 aaKnown RBP10.17□□□□□ -0.78
NEDD9-203ENST00000397378 SPTA1P02549 2419 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 A0A1W2PQD8 194 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 TCRBV21S2A2A0A5A6 115 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 B8ZZF3 427 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 SGK1O00141 431 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 PLK4O00444 970 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 PPEF2O14830 753 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 TLX3O43711 291 aaPredicted RBP10.16□□□□□ -0.78
NEDD9-203ENST00000397378 FAM189A1O60320 539 aa10.16□□□□□ -0.78
NEDD9-203ENST00000397378 KLF8O95600 359 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms