RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ZNF862O60290 1169 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 CYP4A22Q5TCH4 519 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 TAS1R3Q7RTX0 852 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 BANPQ8N9N5 519 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 HAPLN3Q96S86 360 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 CCDC28BQ9BUN5 200 aa25.12■■□□□ 1.61
CSNK1E-203ENST00000396832 H3BRJ5 948 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 MYL2P10916 166 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 LIG4P49917 911 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 LSAMPQ13449 338 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 MORF4L2Q15014 288 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 FBXO27Q8NI29 283 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 NMUR2Q9GZQ4 415 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 UBIAD1Q9Y5Z9 338 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 COMMD3-BMI1R4GMX3 469 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 MAGEC1O60732 1142 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 ICAM1P05362 532 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 RIPOR1Q6ZS17 1223 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 EXD1Q8NHP7 514 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 RMDN3Q96TC7 470 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 CYTH2Q99418 400 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 NDE1Q9NXR1 346 aa25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 HERC5Q9UII4 1024 aaKnown RBP25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 COL11A2P13942 1736 aaPredicted RBP25.11■■□□□ 1.61
CSNK1E-203ENST00000396832 RNASEH1O60930 286 aaKnown RBP25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 VNN1O95497 513 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 CRABP2P29373 138 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 OGDHQ02218 1023 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 ZNF252P-AS1Q0IIN9 211 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 PGM5Q15124 567 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 CFAP157Q5JU67 520 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 RHPN2Q8IUC4 686 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 C4orf19Q8IY42 314 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 TMC2Q8TDI7 906 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 PHACTR1Q9C0D0 580 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 DOCK5Q9H7D0 1870 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 WDR64B1ANS9 1081 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 PMM2O15305 246 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 TGDSO95455 350 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 GLRA2P23416 452 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 MARK2Q7KZI7 788 aaKnown RBP25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 ALYREFQ86V81 257 aaKnown RBP25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 TMPRSS6Q8IU80 811 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 SCUBE1Q8IWY4 988 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 CLPTM1LQ96KA5 538 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 PANX3Q96QZ0 392 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 ST6GALNAC4Q9H4F1 302 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 AP2B1P63010 937 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 CDC16Q13042 620 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 FNBP1LQ5T0N5 605 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 RNASEH2BQ5TBB1 312 aaKnown RBP25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 DCUN1D2Q6PH85 259 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 ADGRD1Q6QNK2 874 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 NET1Q7Z628 596 aaPredicted RBP25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 OGFOD1Q8N543 542 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 ALLCQ8N6M5 410 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 KLHL23Q8NBE8 558 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 SMC1BQ8NDV3 1235 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 PAFAH2Q99487 392 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 STK32BQ9NY57 414 aa25.1■■□□□ 1.61
CSNK1E-203ENST00000396832 CLUHO75153 1309 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 FAM237BA0A1B0GVD1 139 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 USP1O94782 785 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 SPATA31D3P0C874 917 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 PRKD1Q15139 912 aaPredicted RBP25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 EAPPQ56P03 285 aaPredicted RBP25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 SWSAP1Q6NVH7 229 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 SPATA31D4Q6ZUB0 917 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 MYLK4Q86YV6 388 aaPredicted RBP25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 FEZF2Q8TBJ5 459 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 PPP2R3CQ969Q6 453 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 TMEM143Q96AN5 459 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 IL1RAPL1Q9NZN1 696 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 FEM1BQ9UK73 627 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 NUB1Q9Y5A7 615 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 ZNF541Q9H0D2 1346 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 TCRBV7S3A2A0A539 114 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 APBA3O96018 575 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 ENO1P06733 434 aaKnown RBP25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 CUL2Q13617 745 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 DLGAP5Q15398 846 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 MTERF2Q49AM1 385 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 USP37Q86T82 979 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 TRIM74Q86UV6 250 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 TRIM73Q86UV7 250 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 ST13P4Q8IZP2 240 aaPredicted RBP25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 ABRAQ8N0Z2 381 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 RBM15BQ8NDT2 890 aaKnown RBP25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 TRIM11Q96F44 468 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 FBXL18Q96ME1 805 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 SENP7Q9BQF6 1050 aa25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 MRPL47Q9HD33 250 aaKnown RBP25.09■■□□□ 1.61
CSNK1E-203ENST00000396832 CIB2O75838 187 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 YY1P25490 414 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 HIF1AQ16665 826 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 C6orf163Q5TEZ5 329 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 FAM160B2Q86V87 743 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 OR5B17Q8NGF7 314 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 MZB1Q8WU39 189 aa25.08■■□□□ 1.61
CSNK1E-203ENST00000396832 OLFM3Q96PB7 478 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms