RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 HIF1AQ16665 826 aa16.78■□□□□ 0.28
CCHCR1-202ENST00000396263 NBPF20Q3BBV1 942 aa16.78■□□□□ 0.28
CCHCR1-202ENST00000396263 EFHC2Q5JST6 749 aa16.78■□□□□ 0.28
CCHCR1-202ENST00000396263 DENND1BQ6P3S1 775 aa16.78■□□□□ 0.28
CCHCR1-202ENST00000396263 SCARA5Q6ZMJ2 495 aa16.78■□□□□ 0.28
CCHCR1-202ENST00000396263 ANKRD13AQ8IZ07 590 aa16.78■□□□□ 0.28
CCHCR1-202ENST00000396263 TTC13Q8NBP0 860 aa16.78■□□□□ 0.28
CCHCR1-202ENST00000396263 RNF149Q8NC42 400 aa16.78■□□□□ 0.28
CCHCR1-202ENST00000396263 PSMC3IPQ9P2W1 217 aaPredicted RBP16.78■□□□□ 0.28
CCHCR1-202ENST00000396263 PNMA3Q9UL41 463 aa16.78■□□□□ 0.28
CCHCR1-202ENST00000396263 IGKV6-21A0A0C4DH24 114 aa16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 SRGAP2CP0DJJ0 459 aa16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 KRT3P12035 628 aa16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 PDK4Q16654 411 aa16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 HP1BP3Q5SSJ5 553 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 TSHZ1Q6ZSZ6 1077 aa16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 BBS12Q6ZW61 710 aa16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 PPIL6Q8IXY8 311 aa16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 EXOC8Q8IYI6 725 aa16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 ARFGAP1Q8N6T3 406 aa16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 ANKLE1Q8NAG6 615 aa16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 ACTL9Q8TC94 416 aa16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 PAIP2Q9BPZ3 127 aaKnown RBP16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 PTPRHQ9HD43 1115 aa16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 AGTPBP1Q9UPW5 1226 aa16.77■□□□□ 0.28
CCHCR1-202ENST00000396263 MED7O43513 233 aa16.77■□□□□ 0.27
CCHCR1-202ENST00000396263 TYROBPO43914 113 aa16.77■□□□□ 0.27
CCHCR1-202ENST00000396263 TNNC2P02585 160 aa16.77■□□□□ 0.27
CCHCR1-202ENST00000396263 LACTBP83111 547 aaPredicted RBP16.77■□□□□ 0.27
CCHCR1-202ENST00000396263 OTUD4Q01804 1114 aaKnown RBP16.77■□□□□ 0.27
CCHCR1-202ENST00000396263 HADHQ16836 314 aaKnown RBP16.77■□□□□ 0.27
CCHCR1-202ENST00000396263 MPZL3Q6UWV2 235 aa16.77■□□□□ 0.27
CCHCR1-202ENST00000396263 FAM47EQ6ZV65 393 aa16.77■□□□□ 0.27
CCHCR1-202ENST00000396263 THNSL1Q8IYQ7 743 aa16.77■□□□□ 0.27
CCHCR1-202ENST00000396263 ANKRD36BP1Q96IX9 119 aa16.77■□□□□ 0.27
CCHCR1-202ENST00000396263 SSU72Q9NP77 194 aaKnown RBP16.77■□□□□ 0.27
CCHCR1-202ENST00000396263 SPATS2LQ9NUQ6 558 aaKnown RBP16.77■□□□□ 0.27
CCHCR1-202ENST00000396263 BTBD7Q9P203 1132 aa16.77■□□□□ 0.27
CCHCR1-202ENST00000396263 C15orf41Q9Y2V0 281 aa16.77■□□□□ 0.27
CCHCR1-202ENST00000396263 SPDYE5A6NIY4 337 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 ZBTB42B2RXF5 422 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 IL1R2P27930 398 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 CTCFP49711 727 aaPredicted RBP16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 GPX6P59796 221 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 ZC3H12AQ5D1E8 599 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 MAP1SQ66K74 1059 aaPredicted RBP16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 NAT8LQ8N9F0 302 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 JOSD2Q8TAC2 188 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 CPT1BQ92523 772 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 WDR35Q9P2L0 1181 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 CYTH4Q9UIA0 394 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 PHTF1Q9UMS5 762 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 CLUHO75153 1309 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 ENO4A6NNW6 628 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 ACKR2O00590 384 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 CST8O60676 142 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 PEX10O60683 326 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 LGR5O75473 907 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 ANP32DO95626 131 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 KDELR1P24390 212 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 RPA3P35244 121 aaPredicted RBP16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 YARSP54577 528 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 GEMIN4P57678 1058 aaKnown RBP16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 DNAJC3Q13217 504 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 MOGSQ13724 837 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 ERO1BQ86YB8 467 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 C4orf33Q8N1A6 199 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 ZNF570Q96NI8 536 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 BCO2Q9BYV7 579 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 ZWILCHQ9H900 591 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 RABGEF1Q9UJ41 708 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 ZMYND8Q9ULU4 1186 aaPredicted RBP16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 CLEC11AQ9Y240 323 aa16.76■□□□□ 0.27
CCHCR1-202ENST00000396263 A0A0G2JLL6 359 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 E7ESA3 106 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 GOLGA8SH3BPF8 625 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 UNC5CO95185 931 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 PHBP35232 272 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 GDF10P55107 478 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 ARL4CP56559 192 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 PSMC1P62191 440 aaKnown RBP16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 SMTNL2Q2TAL5 461 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 GADL1Q6ZQY3 521 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 CAPN12Q6ZSI9 719 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 PRRT2Q7Z6L0 340 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 KIAA0319LQ8IZA0 1049 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 ATP11CQ8NB49 1132 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 SAE1Q9UBE0 346 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 TJP2Q9UDY2 1190 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 GRID1Q9ULK0 1009 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 ANKRD33BA6NCL7 494 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 SMAPO00193 183 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 KRT16P08779 473 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 CD19P15391 556 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 CA4P22748 312 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 DYNLT1P63172 113 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 LY6KQ17RY6 165 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 ATF7IP2Q5U623 682 aa16.75■□□□□ 0.27
CCHCR1-202ENST00000396263 ANKRD22Q5VYY1 191 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms