RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 GPR65Q8IYL9 337 aa15.98■□□□□ 0.15
PTPN20-206ENST00000395722 DCP1BQ8IZD4 617 aaKnown RBP15.98■□□□□ 0.15
PTPN20-206ENST00000395722 SLC35G2Q8TBE7 412 aa15.98■□□□□ 0.15
PTPN20-206ENST00000395722 CALR3Q96L12 384 aaKnown RBP15.98■□□□□ 0.15
PTPN20-206ENST00000395722 MTRRQ9UBK8 725 aa15.98■□□□□ 0.15
PTPN20-206ENST00000395722 COG5Q9UP83 839 aa15.98■□□□□ 0.15
PTPN20-206ENST00000395722 PCDHB12Q9Y5F1 795 aa15.98■□□□□ 0.15
PTPN20-206ENST00000395722 PCDHGC5Q9Y5F6 944 aa15.98■□□□□ 0.15
PTPN20-206ENST00000395722 BACE2Q9Y5Z0 518 aa15.98■□□□□ 0.15
PTPN20-206ENST00000395722 LCHNA4D1U4 455 aa15.97■□□□□ 0.15
PTPN20-206ENST00000395722 XPO1O14980 1071 aaKnown RBP15.97■□□□□ 0.15
PTPN20-206ENST00000395722 ATMINO43313 823 aaPredicted RBP15.97■□□□□ 0.15
PTPN20-206ENST00000395722 GABBR2O75899 941 aa15.97■□□□□ 0.15
PTPN20-206ENST00000395722 DSG1Q02413 1049 aa15.97■□□□□ 0.15
PTPN20-206ENST00000395722 SHHQ15465 462 aa15.97■□□□□ 0.15
PTPN20-206ENST00000395722 C2CD6Q53TS8 623 aa15.97■□□□□ 0.15
PTPN20-206ENST00000395722 RSPO2Q6UXX9 243 aaPredicted RBP15.97■□□□□ 0.15
PTPN20-206ENST00000395722 CLEC20AQ6ZU45 233 aa15.97■□□□□ 0.15
PTPN20-206ENST00000395722 MSANTD4Q8NCY6 345 aa15.97■□□□□ 0.15
PTPN20-206ENST00000395722 CSNK1G1Q9HCP0 422 aa15.97■□□□□ 0.15
PTPN20-206ENST00000395722 KRT82Q9NSB4 513 aa15.97■□□□□ 0.15
PTPN20-206ENST00000395722 UVRAGQ9P2Y5 699 aa15.97■□□□□ 0.15
PTPN20-206ENST00000395722 TJP2Q9UDY2 1190 aa15.97■□□□□ 0.15
PTPN20-206ENST00000395722 STK39Q9UEW8 545 aa15.97■□□□□ 0.15
PTPN20-206ENST00000395722 STRIP2Q9ULQ0 834 aa15.97■□□□□ 0.15
PTPN20-206ENST00000395722 CAPN6Q9Y6Q1 641 aa15.97■□□□□ 0.15
PTPN20-206ENST00000395722 FANCGO15287 622 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 MOCS3O95396 460 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 ERBB2P04626 1255 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 FAM200BP0CF97 657 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 NFE2Q16621 373 aaPredicted RBP15.96■□□□□ 0.15
PTPN20-206ENST00000395722 XYLT1Q86Y38 959 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 TPCN2Q8NHX9 752 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 C18orf8Q96DM3 657 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 SMARCD1Q96GM5 515 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 HSFY1Q96LI6 401 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 RNPC3Q96LT9 517 aaKnown RBP15.96■□□□□ 0.15
PTPN20-206ENST00000395722 SMOQ99835 787 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 GDF15Q99988 308 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 MED10Q9BTT4 135 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 UBXN6Q9BZV1 441 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 OSGEPQ9NPF4 335 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 RRAGDQ9NQL2 400 aaPredicted RBP15.96■□□□□ 0.15
PTPN20-206ENST00000395722 TMEM30AQ9NV96 361 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 BUB1O43683 1085 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 BEST1O76090 585 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 OR4Q2P0C623 313 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 GNG11P61952 73 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 MAMLD1Q13495 774 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 ZNF268Q14587 947 aaPredicted RBP15.96■□□□□ 0.15
PTPN20-206ENST00000395722 IFI16Q16666 785 aaKnown RBP15.96■□□□□ 0.15
PTPN20-206ENST00000395722 CFAP221Q4G0U5 840 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 ZNF569Q5MCW4 686 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 PPP1R15BQ5SWA1 713 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 SLC8B1Q6J4K2 584 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 LLGL2Q6P1M3 1020 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 PRSS55Q6UWB4 352 aaPredicted RBP15.96■□□□□ 0.15
PTPN20-206ENST00000395722 C4orf50Q6ZRC1 276 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 LRRC57Q8N9N7 239 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 C3orf20Q8ND61 904 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 ZMIZ2Q8NF64 920 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 RIN2Q8WYP3 895 aaPredicted RBP15.96■□□□□ 0.15
PTPN20-206ENST00000395722 KCTD13Q8WZ19 329 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 MCRS1Q96EZ8 462 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 FUBP3Q96I24 572 aaKnown RBP eCLIP15.96■□□□□ 0.15
PTPN20-206ENST00000395722 WDR24Q96S15 920 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 NUP85Q9BW27 656 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 MIS12Q9H081 205 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 CTTNBP2NLQ9P2B4 639 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 WDR35Q9P2L0 1181 aa15.96■□□□□ 0.15
PTPN20-206ENST00000395722 CEP290O15078 2479 aa15.96■□□□□ 0.14
PTPN20-206ENST00000395722 LINC01553A4QN01 128 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 AP1G2O75843 785 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 FGF18O76093 207 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 TNNT1P13805 278 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 BMPR1AP36894 532 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 GLUD2P49448 558 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 CACNA2D1P54289 1103 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 SMARCB1Q12824 385 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 GPR17Q13304 367 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 PSMD5Q16401 504 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 SLC35F6Q8N357 371 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 TRIM58Q8NG06 486 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 IPO4Q8TEX9 1081 aaKnown RBP15.95■□□□□ 0.14
PTPN20-206ENST00000395722 PARVAQ9NVD7 372 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 CHORDC1Q9UHD1 332 aaPredicted RBP15.95■□□□□ 0.14
PTPN20-206ENST00000395722 SCINQ9Y6U3 715 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 PATJQ8NI35 1801 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 GRID2IPA4D2P6 1211 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 HHLA1C9JL84 531 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 E5RJQ4 531 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 ACADSBP45954 432 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 RGS7P49802 495 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 SLC8A3P57103 927 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 SLC39A12Q504Y0 691 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 CYP4A22Q5TCH4 519 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 FAM109BQ6ICB4 259 aaPredicted RBP15.95■□□□□ 0.14
PTPN20-206ENST00000395722 SLFN11Q7Z7L1 901 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 PIGZQ86VD9 579 aa15.95■□□□□ 0.14
PTPN20-206ENST00000395722 ZNF564Q8TBZ8 553 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms