RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SPDYE4A6NLX3 237 aa15.97■□□□□ 0.15
SCAF11-204ENST00000395454 KRIT1O00522 736 aa15.97■□□□□ 0.15
SCAF11-204ENST00000395454 PPEF2O14830 753 aa15.97■□□□□ 0.15
SCAF11-204ENST00000395454 CILPO75339 1184 aa15.97■□□□□ 0.15
SCAF11-204ENST00000395454 B3GAT3O94766 335 aa15.97■□□□□ 0.15
SCAF11-204ENST00000395454 ALDH2P05091 517 aa15.97■□□□□ 0.15
SCAF11-204ENST00000395454 GLI1P08151 1106 aa15.97■□□□□ 0.15
SCAF11-204ENST00000395454 CD58P19256 250 aa15.97■□□□□ 0.15
SCAF11-204ENST00000395454 RPL9P32969 192 aaKnown RBP15.97■□□□□ 0.15
SCAF11-204ENST00000395454 RAD23BP54727 409 aa15.97■□□□□ 0.15
SCAF11-204ENST00000395454 GSCP56915 257 aaPredicted RBP15.97■□□□□ 0.15
SCAF11-204ENST00000395454 EMBQ6PCB8 327 aa15.97■□□□□ 0.15
SCAF11-204ENST00000395454 IFT20Q8IY31 132 aa15.97■□□□□ 0.15
SCAF11-204ENST00000395454 WHAMMQ8TF30 809 aa15.97■□□□□ 0.15
SCAF11-204ENST00000395454 DDX27Q96GQ7 796 aaKnown RBP15.97■□□□□ 0.15
SCAF11-204ENST00000395454 UROC1Q96N76 676 aa15.97■□□□□ 0.15
SCAF11-204ENST00000395454 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.97■□□□□ 0.15
SCAF11-204ENST00000395454 ANAPC7Q9UJX3 599 aa15.97■□□□□ 0.15
SCAF11-204ENST00000395454 NT5C1B-RDH14C9J2C7 533 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 F8W810 466 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 PIRO00625 290 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 NRP1O14786 923 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 SART1O43290 800 aaKnown RBP15.96■□□□□ 0.15
SCAF11-204ENST00000395454 RAD51CO43502 376 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 ZMYND10O75800 440 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 PROSCO94903 275 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 CALB1P05937 261 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 P4HA1P13674 534 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 BCAR1P56945 870 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 NNTQ13423 1086 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 WDR72Q3MJ13 1102 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 TMEM35BQ8NCS4 154 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 C3orf58Q8NDZ4 430 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 CAVIN3Q969G5 261 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 C11orf70Q9BRQ4 267 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 PRO3102Q9H379 93 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 FAN1Q9Y2M0 1017 aa15.96■□□□□ 0.15
SCAF11-204ENST00000395454 SPOPO43791 374 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 HEXIM1O94992 359 aaKnown RBP15.96■□□□□ 0.14
SCAF11-204ENST00000395454 CA3P07451 260 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 GALTP07902 379 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 IGFBP6P24592 240 aaPredicted RBP15.96■□□□□ 0.14
SCAF11-204ENST00000395454 BRD2P25440 801 aaKnown RBP15.96■□□□□ 0.14
SCAF11-204ENST00000395454 PBX2P40425 430 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 SLC11A1P49279 550 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 RNASE9P60153 205 aaKnown RBP15.96■□□□□ 0.14
SCAF11-204ENST00000395454 SLC7A5Q01650 507 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 MYO1EQ12965 1108 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 PPP1R15BQ5SWA1 713 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 MMS22LQ6ZRQ5 1243 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 PASD1Q8IV76 773 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 WDTC1Q8N5D0 677 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 SP7Q8TDD2 431 aaPredicted RBP15.96■□□□□ 0.14
SCAF11-204ENST00000395454 HPDLQ96IR7 371 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 BTBD6Q96KE9 485 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 ZNF560Q96MR9 790 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 TMEM175Q9BSA9 504 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 PBX4Q9BYU1 374 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 SMYD3Q9H7B4 428 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 PARVAQ9NVD7 372 aa15.96■□□□□ 0.14
SCAF11-204ENST00000395454 NXF1Q9UBU9 619 aaKnown RBP15.96■□□□□ 0.14
SCAF11-204ENST00000395454 FAM170AA1A519 330 aa15.95■□□□□ 0.14
SCAF11-204ENST00000395454 MYO1FO00160 1098 aa15.95■□□□□ 0.14
SCAF11-204ENST00000395454 ITGB1P05556 798 aa15.95■□□□□ 0.14
SCAF11-204ENST00000395454 LAG3P18627 525 aa15.95■□□□□ 0.14
SCAF11-204ENST00000395454 CYP1B1Q16678 543 aa15.95■□□□□ 0.14
SCAF11-204ENST00000395454 KCNT2Q6UVM3 1135 aa15.95■□□□□ 0.14
SCAF11-204ENST00000395454 SCARA5Q6ZMJ2 495 aa15.95■□□□□ 0.14
SCAF11-204ENST00000395454 LRRC52Q8N7C0 313 aa15.95■□□□□ 0.14
SCAF11-204ENST00000395454 SLC4A11Q8NBS3 891 aa15.95■□□□□ 0.14
SCAF11-204ENST00000395454 AP1M1Q9BXS5 423 aa15.95■□□□□ 0.14
SCAF11-204ENST00000395454 TRIM7Q9C029 511 aa15.95■□□□□ 0.14
SCAF11-204ENST00000395454 PCDHA11Q9Y5I1 949 aa15.95■□□□□ 0.14
SCAF11-204ENST00000395454 TRIOBPQ9H2D6 2365 aa15.95■□□□□ 0.14
SCAF11-204ENST00000395454 TMEM110-MUSTN1A8MSY1 372 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 MED7O43513 233 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 PNPLA4P41247 253 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 TAF6P49848 677 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 RWDD2BP57060 319 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 LILRA4P59901 499 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 DCLRE1AQ6PJP8 1040 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 TMEM173Q86WV6 379 aaPredicted RBP15.94■□□□□ 0.14
SCAF11-204ENST00000395454 CPNE8Q86YQ8 564 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 ZNF558Q96NG5 402 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 AAASQ9NRG9 546 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 NR2E1Q9Y466 385 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 KIAA1671Q9BY89 1806 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 GOLGA6L10A0A0M3HER8 536 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 LINC01553A4QN01 128 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 PSTPIP1O43586 416 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 TADA2AO75478 443 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 PYGMP11217 842 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 AARSP49588 968 aaKnown RBP eCLIP15.94■□□□□ 0.14
SCAF11-204ENST00000395454 TAP1Q03518 808 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 KLHL7Q8IXQ5 586 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 COLGALT1Q8NBJ5 622 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 C1orf131Q8NDD1 294 aaKnown RBP15.94■□□□□ 0.14
SCAF11-204ENST00000395454 CLP1Q92989 425 aaKnown RBP15.94■□□□□ 0.14
SCAF11-204ENST00000395454 COLEC11Q9BWP8 271 aa15.94■□□□□ 0.14
SCAF11-204ENST00000395454 ELOVL4Q9GZR5 314 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms