RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 PCDHA11Q9Y5I1 949 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 NRP1O14786 923 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 B3GAT3O94766 335 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 ZRANB2O95218 330 aaKnown RBP eCLIP20.38■□□□□ 0.85
LMNB1-202ENST00000395354 GALTP07902 379 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 SLC11A1P49279 550 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 VSNL1P62760 191 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 PPP2R5EQ16537 467 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 DCAF12L1Q5VU92 463 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 C8orf74Q6P047 294 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 C1orf131Q8NDD1 294 aaKnown RBP20.38■□□□□ 0.85
LMNB1-202ENST00000395354 LRRC1Q9BTT6 524 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 COLEC11Q9BWP8 271 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 NT5C1AQ9BXI3 368 aa20.38■□□□□ 0.85
LMNB1-202ENST00000395354 PRG3Q9Y2Y8 225 aaPredicted RBP20.38■□□□□ 0.85
LMNB1-202ENST00000395354 PROSCO94903 275 aa20.37■□□□□ 0.85
LMNB1-202ENST00000395354 LAG3P18627 525 aa20.37■□□□□ 0.85
LMNB1-202ENST00000395354 IGFBP6P24592 240 aaPredicted RBP20.37■□□□□ 0.85
LMNB1-202ENST00000395354 MAN1A1P33908 653 aa20.37■□□□□ 0.85
LMNB1-202ENST00000395354 PBX3P40426 434 aa20.37■□□□□ 0.85
LMNB1-202ENST00000395354 GSCP56915 257 aaPredicted RBP20.37■□□□□ 0.85
LMNB1-202ENST00000395354 DENND1BQ6P3S1 775 aa20.37■□□□□ 0.85
LMNB1-202ENST00000395354 KCNT2Q6UVM3 1135 aa20.37■□□□□ 0.85
LMNB1-202ENST00000395354 UNC93AQ86WB7 457 aa20.37■□□□□ 0.85
LMNB1-202ENST00000395354 ERICH1Q86X53 443 aa20.37■□□□□ 0.85
LMNB1-202ENST00000395354 FEZF2Q8TBJ5 459 aa20.37■□□□□ 0.85
LMNB1-202ENST00000395354 ALG3Q92685 438 aa20.37■□□□□ 0.85
LMNB1-202ENST00000395354 BTBD6Q96KE9 485 aa20.37■□□□□ 0.85
LMNB1-202ENST00000395354 TWNKQ96RR1 684 aa20.37■□□□□ 0.85
LMNB1-202ENST00000395354 ZNF446Q9NWS9 450 aa20.37■□□□□ 0.85
LMNB1-202ENST00000395354 GDAP2Q9NXN4 497 aa20.37■□□□□ 0.85
LMNB1-202ENST00000395354 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.37■□□□□ 0.85
LMNB1-202ENST00000395354 TCRBV5S1A1TA0A578 114 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 LINC01553A4QN01 128 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 NT5C1B-RDH14C9J2C7 533 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 SSTR3P32745 418 aaPredicted RBP20.36■□□□□ 0.85
LMNB1-202ENST00000395354 PBX2P40425 430 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 NDST1P52848 882 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 MAP9Q49MG5 647 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 SGO2Q562F6 1265 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 CLP1Q92989 425 aaKnown RBP20.36■□□□□ 0.85
LMNB1-202ENST00000395354 HEXIM2Q96MH2 286 aaKnown RBP20.36■□□□□ 0.85
LMNB1-202ENST00000395354 ZNF558Q96NG5 402 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 PLVAPQ9BX97 442 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 PBX4Q9BYU1 374 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 DNAI2Q9GZS0 605 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 AAASQ9NRG9 546 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 WDR35Q9P2L0 1181 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 HMGXB4Q9UGU5 601 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 MSRAQ9UJ68 235 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 SNX9Q9Y5X1 595 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 SCN1AP35498 2009 aa20.36■□□□□ 0.85
LMNB1-202ENST00000395354 F8W810 466 aa20.35■□□□□ 0.85
LMNB1-202ENST00000395354 KRIT1O00522 736 aa20.35■□□□□ 0.85
LMNB1-202ENST00000395354 CA3P07451 260 aa20.35■□□□□ 0.85
LMNB1-202ENST00000395354 FAM163BP0C2L3 166 aa20.35■□□□□ 0.85
LMNB1-202ENST00000395354 RWDD2BP57060 319 aa20.35■□□□□ 0.85
LMNB1-202ENST00000395354 LILRA4P59901 499 aa20.35■□□□□ 0.85
LMNB1-202ENST00000395354 RAB30Q15771 203 aa20.35■□□□□ 0.85
LMNB1-202ENST00000395354 COLGALT1Q8NBJ5 622 aa20.35■□□□□ 0.85
LMNB1-202ENST00000395354 C3orf58Q8NDZ4 430 aa20.35■□□□□ 0.85
LMNB1-202ENST00000395354 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.35■□□□□ 0.85
LMNB1-202ENST00000395354 KRT35Q92764 455 aa20.35■□□□□ 0.85
LMNB1-202ENST00000395354 IP6K2Q9UHH9 426 aa20.35■□□□□ 0.85
LMNB1-202ENST00000395354 COLQQ9Y215 455 aaPredicted RBP20.35■□□□□ 0.85
LMNB1-202ENST00000395354 YBX2Q9Y2T7 364 aaKnown RBP20.35■□□□□ 0.85
LMNB1-202ENST00000395354 CARNS1A5YM72 827 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 TMEM191CA6NGB0 347 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 O00370 1275 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 TADA2AO75478 443 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 FGGP02679 453 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 LINC00271P0C7V0 271 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 TNFRSF8P28908 595 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 TAF6P49848 677 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 RNASE9P60153 205 aaKnown RBP20.34■□□□□ 0.85
LMNB1-202ENST00000395354 SV2CQ496J9 727 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 SEL1L2Q5TEA6 688 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 DNAJC24Q6P3W2 148 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 LCLAT1Q6UWP7 414 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 CD300LGQ6UXG3 332 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 C3orf20Q8ND61 904 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 HASPINQ8TF76 798 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 SLITRK6Q9H5Y7 841 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 STIM2Q9P246 746 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.34■□□□□ 0.85
LMNB1-202ENST00000395354 PCDHB12Q9Y5F1 795 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 GBF1Q92538 1859 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 KPNA7A9QM74 516 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 TMEM189-UBE2V1I3L0A0 370 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 SPTLC1O15269 473 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 RRP9O43818 475 aaKnown RBP20.34■□□□□ 0.85
LMNB1-202ENST00000395354 MICAL2O94851 1124 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 ITGB1P05556 798 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 LONRF2Q1L5Z9 754 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 C2CD6Q53TS8 623 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 PPP1R15BQ5SWA1 713 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 BEND6Q5SZJ8 279 aaPredicted RBP20.34■□□□□ 0.85
LMNB1-202ENST00000395354 CCNI2Q6ZMN8 369 aaPredicted RBP20.34■□□□□ 0.85
LMNB1-202ENST00000395354 DPH6Q7L8W6 267 aa20.34■□□□□ 0.85
LMNB1-202ENST00000395354 LIMS2Q7Z4I7 341 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms