RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 ZSWIM3Q96MP5 696 aa14.23□□□□□ -0.13
HLA-DMA-202ENST00000395303 MED15Q96RN5 788 aa14.23□□□□□ -0.13
HLA-DMA-202ENST00000395303 NIF3L1Q9GZT8 377 aa14.23□□□□□ -0.13
HLA-DMA-202ENST00000395303 MMRN2Q9H8L6 949 aa14.23□□□□□ -0.13
HLA-DMA-202ENST00000395303 UXTQ9UBK9 157 aaPredicted RBP14.23□□□□□ -0.13
HLA-DMA-202ENST00000395303 WNT16Q9UBV4 365 aa14.23□□□□□ -0.13
HLA-DMA-202ENST00000395303 RWDD2AQ9UIY3 292 aa14.23□□□□□ -0.13
HLA-DMA-202ENST00000395303 ZMYM5Q9UJ78 669 aa14.23□□□□□ -0.13
HLA-DMA-202ENST00000395303 SLC38A8A6NNN8 435 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 SOBPA7XYQ1 873 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 TRIM66O15016 1216 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 GNA14O95837 355 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 GJA1P17302 382 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 NDST1P52848 882 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 STX17P56962 302 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 DDR2Q16832 855 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 DCAF17Q5H9S7 520 aaPredicted RBP14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 FAM78AQ5JUQ0 283 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 SDHAF4Q5VUM1 108 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 TCERG1LQ5VWI1 586 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 TANGO2Q6ICL3 276 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 RBM43Q6ZSC3 357 aaKnown RBP14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 PAQR9Q6ZVX9 377 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 TRIM59Q8IWR1 403 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 FAM200AQ8TCP9 573 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 GPT2Q8TD30 523 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 SMARCD2Q92925 531 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 C8orf48Q96LL4 319 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 SRRTQ9BXP5 876 aaKnown RBP14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 B3GNT5Q9BYG0 378 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 ELOVL4Q9GZR5 314 aa14.22□□□□□ -0.13
HLA-DMA-202ENST00000395303 MYO15AQ9UKN7 3530 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 GOLGA6L22H0YM25 854 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 P4HA2O15460 535 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 CILPO75339 1184 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 FGFR1OPO95684 399 aaKnown RBP14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 DDX6P26196 483 aaKnown RBP eCLIP14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 FMO5P49326 533 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 NUBP1P53384 320 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 NLRP12P59046 1061 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 CYP27A1Q02318 531 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 TAF12Q16514 161 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 CCDC40Q4G0X9 1142 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 TTC39CQ8N584 583 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 TMEM105Q8N8V8 129 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 CCDC150Q8NCX0 1101 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 GPR152Q8TDT2 470 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 WHAMMQ8TF30 809 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 E2F7Q96AV8 911 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 KXD1Q9BQD3 176 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 TTLL2Q9BWV7 592 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 PLA2G2FQ9BZM2 168 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 ATXN3LQ9H3M9 355 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 TASP1Q9H6P5 420 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 ZFP14Q9HCL3 533 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 TMEM30AQ9NV96 361 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 OBP2AQ9NY56 170 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 HMGXB4Q9UGU5 601 aa14.21□□□□□ -0.13
HLA-DMA-202ENST00000395303 MYOFQ9NZM1 2061 aa14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 GALR2O43603 387 aaPredicted RBP14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 TADA3O75528 432 aa14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 ARHGAP15Q53QZ3 475 aa14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 STXBP5Q5T5C0 1151 aa14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 GPR158Q5T848 1215 aa14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 ACOT1Q86TX2 421 aa14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 FAM35AQ86V20 835 aa14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 SCN4BQ8IWT1 228 aa14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 STKLD1Q8NE28 680 aa14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 ZSCAN18Q8TBC5 510 aaPredicted RBP14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 DEPDC1BQ8WUY9 529 aa14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 TATDN2Q93075 761 aa14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 GCNAQ96QF7 691 aa14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 TWNKQ96RR1 684 aa14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 ZNF518BQ9C0D4 1074 aa14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 RIF1Q5UIP0 2472 aaKnown RBP14.2□□□□□ -0.14
HLA-DMA-202ENST00000395303 CACNA1IQ9P0X4 2223 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 NCANO14594 1321 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 ATP8B3O60423 1300 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 PROB1E7EW31 1015 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 F8VP50 259 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 H0Y858 1186 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 CLDN5O00501 218 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 GFRA3O60609 400 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 CLSTN1O94985 981 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 CCDC192P0DO97 292 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 ERCC5P28715 1186 aaPredicted RBP14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 GRIK1P39086 918 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 CACNA2D1P54289 1103 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 GPC5P78333 572 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 CYP4F8P98187 520 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 DPCR1Q3MIW9 517 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 CT47A1Q5JQC4 288 aaPredicted RBP14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 WDR44Q5JSH3 913 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 VITQ6UXI7 678 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 DENND5BQ6ZUT9 1274 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 ARID3BQ8IVW6 561 aaPredicted RBP14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 FUKQ8N0W3 1084 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 UBR7Q8N806 425 aa14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 ST13P5Q8NFI4 369 aaPredicted RBP14.19□□□□□ -0.14
HLA-DMA-202ENST00000395303 LMO3Q8TAP4 145 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms