RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 BANPQ8N9N5 519 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 TCP10LQ8TDR4 215 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 NPHS2Q9NP85 383 aa19.76■□□□□ 0.75
CBX1-202ENST00000393408 ABLIM1O14639 778 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 TM9SF1O15321 606 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 PEX11AO75192 247 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 CBX6O95503 412 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 CD48P09326 243 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 UBA1P22314 1058 aaKnown RBP19.75■□□□□ 0.75
CBX1-202ENST00000393408 YWHAEP62258 255 aaKnown RBP19.75■□□□□ 0.75
CBX1-202ENST00000393408 CNTN2Q02246 1040 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 TAF1BQ53T94 588 aaPredicted RBP19.75■□□□□ 0.75
CBX1-202ENST00000393408 PLEKHG4Q58EX7 1191 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 FYB2Q5VWT5 728 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 LONP2Q86WA8 852 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 UNC45BQ8IWX7 931 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 WRNIP1Q96S55 665 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 PDGFDQ9GZP0 370 aaPredicted RBP19.75■□□□□ 0.75
CBX1-202ENST00000393408 LHX5Q9H2C1 402 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 RNPEPL1Q9HAU8 725 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 HOXC6P09630 235 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 RASSF2P50749 326 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 TFAMQ00059 246 aaKnown RBP19.75■□□□□ 0.75
CBX1-202ENST00000393408 SURF1Q15526 300 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 BZW1Q7L1Q6 419 aaKnown RBP19.75■□□□□ 0.75
CBX1-202ENST00000393408 SAMD7Q7Z3H4 446 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 TAB3Q8N5C8 712 aaPredicted RBP19.75■□□□□ 0.75
CBX1-202ENST00000393408 DNERQ8NFT8 737 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 KANSL3Q9P2N6 904 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 ZFP69BQ9UJL9 534 aa19.75■□□□□ 0.75
CBX1-202ENST00000393408 C19orf81C9J6K1 198 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 FARP2O94887 1054 aaPredicted RBP19.74■□□□□ 0.75
CBX1-202ENST00000393408 TSHRP16473 764 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 GNAZP19086 355 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 PSMC1P62191 440 aaKnown RBP19.74■□□□□ 0.75
CBX1-202ENST00000393408 BBS9Q3SYG4 887 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 CDCA2Q69YH5 1023 aaPredicted RBP19.74■□□□□ 0.75
CBX1-202ENST00000393408 PALM2Q8IXS6 379 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 ALKBH8Q96BT7 664 aaKnown RBP19.74■□□□□ 0.75
CBX1-202ENST00000393408 SLC17A7Q9P2U7 560 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 XPO7Q9UIA9 1087 aaKnown RBP19.74■□□□□ 0.75
CBX1-202ENST00000393408 NUMBLQ9Y6R0 609 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 MGAMO43451 1857 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 ANK1P16157 1881 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 WDR91A4D1P6 747 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 SPDYE16A6NNV3 312 aaPredicted RBP19.74■□□□□ 0.75
CBX1-202ENST00000393408 SMAPO00193 183 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 CD19P15391 556 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 GM2AP17900 193 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 EPHB2P29323 1055 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 SEPT7Q16181 437 aaKnown RBP19.74■□□□□ 0.75
CBX1-202ENST00000393408 SMYD5Q6GMV2 418 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 PDIK1LQ8N165 341 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 JDP2Q8WYK2 163 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 VPS11Q9H270 941 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 C12orf65Q9H3J6 166 aaKnown RBP19.74■□□□□ 0.75
CBX1-202ENST00000393408 TLE6Q9H808 572 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 SAR1AQ9NR31 198 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 POLIQ9UNA4 740 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 FZD1Q9UP38 647 aa19.74■□□□□ 0.75
CBX1-202ENST00000393408 GOLGA8RI6L899 631 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 TROVE2P10155 538 aaKnown RBP eCLIP19.73■□□□□ 0.75
CBX1-202ENST00000393408 CALB2P22676 271 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 STAT5BP51692 787 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 CTC1Q2NKJ3 1217 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 EMC1Q8N766 993 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 LNPEPQ9UIQ6 1025 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 SSC5DA1L4H1 1573 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 PRKCBP05771 671 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 RNASELQ05823 741 aaKnown RBP19.73■□□□□ 0.75
CBX1-202ENST00000393408 MTM1Q13496 603 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 ZNF772Q68DY9 489 aaPredicted RBP19.73■□□□□ 0.75
CBX1-202ENST00000393408 CLNKQ7Z7G1 428 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 MTDHQ86UE4 582 aaKnown RBP19.73■□□□□ 0.75
CBX1-202ENST00000393408 XYLT1Q86Y38 959 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 RFX6Q8HWS3 928 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 FAM71DQ8N9W8 422 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 CMASQ8NFW8 434 aaPredicted RBP19.73■□□□□ 0.75
CBX1-202ENST00000393408 RFWD2Q8NHY2 731 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 KCNV2Q8TDN2 545 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 ANKRD27Q96NW4 1050 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 CPXM1Q96SM3 734 aa19.73■□□□□ 0.75
CBX1-202ENST00000393408 KLF6Q99612 283 aaPredicted RBP19.73■□□□□ 0.75
CBX1-202ENST00000393408 METTL5Q9NRN9 209 aaKnown RBP19.73■□□□□ 0.75
CBX1-202ENST00000393408 APOC4-APOC2K7ER74 178 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 APOC2P02655 101 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 RPS12P25398 132 aaKnown RBP19.72■□□□□ 0.75
CBX1-202ENST00000393408 PTPN4P29074 926 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 EIF3EP60228 445 aaKnown RBP19.72■□□□□ 0.75
CBX1-202ENST00000393408 FAM160B1Q5W0V3 765 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 STK32AQ8WU08 396 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 MANSC1Q9H8J5 431 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 MED7O43513 233 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 ECM2O94769 699 aaPredicted RBP19.72■□□□□ 0.75
CBX1-202ENST00000393408 SRGAP2CP0DJJ0 459 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 RAP1GAPP47736 663 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 LAMTOR4Q0VGL1 99 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 OVGP1Q12889 678 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 WASHC2DQ5SRD0 308 aa19.72■□□□□ 0.75
CBX1-202ENST00000393408 IER5Q5VY09 327 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms