RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 METRNQ9UJH8 293 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 FBXL21Q9UKT6 434 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 ASB3Q9Y575 518 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 ZFP37Q9Y6Q3 630 aaPredicted RBP8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 DOCK6Q96HP0 2047 aa8.17□□□□□ -1.1
HMGB3P1-201ENST00000393368 WDFY4Q6ZS81 3184 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 BICDL2A1A5D9 508 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 KRBA1A5PL33 1030 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 STX10O60499 249 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 BEST1O76090 585 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 NOL4O94818 638 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 SRFP11831 508 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 COL9A1P20849 921 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 ADORA2BP29275 332 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 GTF2H1P32780 548 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 PPP1R2P41236 205 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 FMO5P49326 533 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 NLRP12P59046 1061 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 MCCD1P59942 119 aaPredicted RBP8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 RPL10AP62906 217 aaKnown RBP8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 ENPEPQ07075 957 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 TXNDC8Q6A555 127 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 VITQ6UXI7 678 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 PAQR9Q6ZVX9 377 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 MTSS1LQ765P7 747 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 FRMD5Q7Z6J6 570 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 FILIP1Q7Z7B0 1213 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 FAM35AQ86V20 835 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 CREBRFQ8IUR6 639 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 FUKQ8N0W3 1084 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 MAB21L3Q8N8X9 362 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 LEMD2Q8NC56 503 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 CCDC150Q8NCX0 1101 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 TTC16Q8NEE8 873 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 FLCNQ8NFG4 579 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 SLC2A14Q8TDB8 520 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 SMARCD2Q92925 531 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 JAKMIP2Q96AA8 810 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 FUBP3Q96I24 572 aaKnown RBP eCLIP8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 LRRC3BQ96PB8 259 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 GCNAQ96QF7 691 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 SLC22A12Q96S37 553 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 KCNK16Q96T55 309 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 SLC46A2Q9BY10 475 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 ELOVL4Q9GZR5 314 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 TRPC7Q9HCX4 862 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 RWDD2AQ9UIY3 292 aa8.16□□□□□ -1.1
HMGB3P1-201ENST00000393368 C2orf78A6NCI8 922 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 HEPACAM2A8MVW5 462 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 ECI2O75521 394 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 MICAL2O94851 1124 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 CALCAP01258 141 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 F11P03951 625 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 CSH1P0DML2 217 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 CSH2P0DML3 217 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 C7P10643 843 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 NPR3P17342 541 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 ANXA13P27216 316 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 CDC25CP30307 473 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 MAGEA11P43364 429 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 APBA1Q02410 837 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 INCA1Q0VD86 236 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 MAPRE1Q15691 268 aaKnown RBP8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 WDR44Q5JSH3 913 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 CWF19L1Q69YN2 538 aaKnown RBP8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 VSTM1Q6UX27 236 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 DENND5BQ6ZUT9 1274 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 ARID3BQ8IVW6 561 aaPredicted RBP8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 TRIM59Q8IWR1 403 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 FBXL6Q8N531 539 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 ZMIZ2Q8NF64 920 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 TTC8Q8TAM2 541 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 RIN3Q8TB24 985 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 KAT5Q92993 513 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 NXPE3Q969Y0 559 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 ELSPBP1Q96BH3 223 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 ZFYVE19Q96K21 471 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 TNIP3Q96KP6 325 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 CNOT6LQ96LI5 555 aaKnown RBP8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 MFSD1Q9H3U5 465 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 METTL14Q9HCE5 456 aaKnown RBP8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 ZFP14Q9HCL3 533 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 ARHGEF3Q9NR81 526 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 CISHQ9NSE2 258 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 CCL26Q9Y258 94 aa8.15□□□□□ -1.1
HMGB3P1-201ENST00000393368 NCOR1O75376 2440 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 DOCK8Q8NF50 2099 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 GOLGA6L22H0YM25 854 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 TRIM66O15016 1216 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 PI15O43692 258 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 CILPO75339 1184 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 AP1G2O75843 785 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 FGF19O95750 216 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 ABL1P00519 1130 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 AFPP02771 609 aaKnown RBP8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 FAM163BP0C2L3 166 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 CD72P21854 359 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 GDI1P31150 447 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 RAD23BP54727 409 aa8.14□□□□□ -1.11
HMGB3P1-201ENST00000393368 MAP3K7CLP57077 242 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms