RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 COPAP53621 1224 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 VPS72Q15906 364 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 NEPROQ6NW34 567 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 RNF207Q6ZRF8 634 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 CYFIP1Q7L576 1253 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 ARID3BQ8IVW6 561 aaPredicted RBP7.94□□□□□ -1.14
VTI1A-201ENST00000393077 TRIM59Q8IWR1 403 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 FAM20CQ8IXL6 584 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 KBTBD2Q8IY47 623 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 AFAP1L2Q8N4X5 818 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 SLC7A6OSQ96CW6 309 aaPredicted RBP7.94□□□□□ -1.14
VTI1A-201ENST00000393077 IFT43Q96FT9 208 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 CLPTM1LQ96KA5 538 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 TUT1Q9H6E5 874 aaKnown RBP7.94□□□□□ -1.14
VTI1A-201ENST00000393077 FBXO6Q9NRD1 293 aaPredicted RBP7.94□□□□□ -1.14
VTI1A-201ENST00000393077 GNPTGQ9UJJ9 305 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 SQORQ9Y6N5 450 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 RTL9Q8NET4 1388 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 PFASO15067 1338 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 ILVBLA1L0T0 632 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 H0YIN7 160 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 SNPHO15079 494 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 XRCC5P13010 732 aaKnown RBP7.94□□□□□ -1.14
VTI1A-201ENST00000393077 ZNF76P36508 570 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 PHKA2P46019 1235 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 FLOT2Q14254 428 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 RRP1BQ14684 758 aaKnown RBP7.94□□□□□ -1.14
VTI1A-201ENST00000393077 KCNJ8Q15842 424 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 PCSK7Q16549 785 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 GPR107Q5VW38 600 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 MFSD5Q6N075 450 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 XKR5Q6UX68 686 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 CYP2U1Q7Z449 544 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 ZNF34Q8IZ26 560 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 ZNF654Q8IZM8 581 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 APPL2Q8NEU8 664 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 SPOCK2Q92563 424 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 AZIN2Q96A70 460 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 C8orf48Q96LL4 319 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 SLX1AQ9BQ83 275 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.94□□□□□ -1.14
VTI1A-201ENST00000393077 DNAJB4Q9UDY4 337 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 TNKSO95271 1327 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 PXDNLA1KZ92 1463 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 CENPXA8MT69 81 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 COPEO14579 308 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 ITM2AO43736 263 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 TSPAN1O60635 241 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 MAGEC1O60732 1142 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 FBXO21O94952 628 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 GSNP06396 782 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 COL6A2P12110 1019 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 PRDX5P30044 214 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 TTKP33981 857 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 HOXD13P35453 343 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 NAPAP54920 295 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 TRIM25Q14258 630 aaKnown RBP7.94□□□□□ -1.14
VTI1A-201ENST00000393077 LRRC41Q15345 812 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 TBCCQ15814 346 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 PDK4Q16654 411 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 FSCBQ5H9T9 825 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 TCHHL1Q5QJ38 904 aaPredicted RBP7.94□□□□□ -1.14
VTI1A-201ENST00000393077 TRMT1LQ7Z2T5 733 aaKnown RBP7.94□□□□□ -1.14
VTI1A-201ENST00000393077 MMAAQ8IVH4 418 aaKnown RBP7.94□□□□□ -1.14
VTI1A-201ENST00000393077 ING2Q9H160 280 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 GLT8D2Q9H1C3 349 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 VPS45Q9NRW7 570 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 UCKL1Q9NWZ5 548 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 SALL4Q9UJQ4 1053 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 MYH7BA7E2Y1 1941 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 XDHP47989 1333 aa7.94□□□□□ -1.14
VTI1A-201ENST00000393077 CCDC195A0A1B0GUA6 201 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 A0A1W2PQ72 361 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 CENPBD1B2RD01 187 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 KMOO15229 486 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 USP12O75317 370 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 CSF1RP07333 972 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 SLC9A3P48764 834 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 LETM2Q2VYF4 491 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 OTOAQ7RTW8 1153 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 MB21D2Q8IYB1 491 aaPredicted RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 NEDD1Q8NHV4 660 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 CERKQ8TCT0 537 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 C1orf54Q8WWF1 131 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 CSRNP1Q96S65 589 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 STRBPQ96SI9 672 aaKnown RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 EYA3Q99504 573 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 KLF6Q99612 283 aaPredicted RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 MAGEF1Q9HAY2 307 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 SLC38A10Q9HBR0 1119 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.93□□□□□ -1.14
VTI1A-201ENST00000393077 PPM1HQ9ULR3 514 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 RWDD3Q9Y3V2 267 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 MEI4A8MW99 385 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 HNRNPCL2B2RXH8 293 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 GOLGA8MH3BSY2 632 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 SPAG6O75602 509 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 TM7SF2O76062 418 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 IL32P24001 234 aa7.93□□□□□ -1.14
VTI1A-201ENST00000393077 CDK9P50750 372 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms