RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 RBAKQ9NYW8 714 aaPredicted RBP14.64□□□□□ -0.07
CCDC57-203ENST00000392343 SNCAIPQ9Y6H5 919 aa14.64□□□□□ -0.07
CCDC57-203ENST00000392343 LOXHD1Q8IVV2 1947 aa14.64□□□□□ -0.07
CCDC57-203ENST00000392343 ZC3H11AO75152 810 aaKnown RBP eCLIP14.64□□□□□ -0.07
CCDC57-203ENST00000392343 ITGAVP06756 1048 aa14.64□□□□□ -0.07
CCDC57-203ENST00000392343 YWHAGP61981 247 aaKnown RBP eCLIP14.64□□□□□ -0.07
CCDC57-203ENST00000392343 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
CCDC57-203ENST00000392343 TAF5Q15542 800 aa14.64□□□□□ -0.07
CCDC57-203ENST00000392343 LRRC36Q1X8D7 754 aa14.64□□□□□ -0.07
CCDC57-203ENST00000392343 MTERF2Q49AM1 385 aa14.64□□□□□ -0.07
CCDC57-203ENST00000392343 SCARA5Q6ZMJ2 495 aa14.64□□□□□ -0.07
CCDC57-203ENST00000392343 NAT8LQ8N9F0 302 aa14.64□□□□□ -0.07
CCDC57-203ENST00000392343 SLC13A1Q9BZW2 595 aa14.64□□□□□ -0.07
CCDC57-203ENST00000392343 POLR3FQ9H1D9 316 aaPredicted RBP14.64□□□□□ -0.07
CCDC57-203ENST00000392343 CPSF2Q9P2I0 782 aaKnown RBP14.64□□□□□ -0.07
CCDC57-203ENST00000392343 FEM1BQ9UK73 627 aa14.64□□□□□ -0.07
CCDC57-203ENST00000392343 IKBKGQ9Y6K9 419 aa14.64□□□□□ -0.07
CCDC57-203ENST00000392343 LRRC37AA6NMS7 1700 aa14.64□□□□□ -0.07
CCDC57-203ENST00000392343 NRXN2Q9P2S2 1712 aa14.64□□□□□ -0.07
CCDC57-203ENST00000392343 MAP3K7O43318 606 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 EXTL3O43909 919 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 IL1R2P27930 398 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 PRKD1Q15139 912 aaPredicted RBP14.63□□□□□ -0.07
CCDC57-203ENST00000392343 DRICH1Q6PGQ1 229 aaPredicted RBP14.63□□□□□ -0.07
CCDC57-203ENST00000392343 PRPF39Q86UA1 669 aaKnown RBP14.63□□□□□ -0.07
CCDC57-203ENST00000392343 FAM160B2Q86V87 743 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 CTAGE3PQ8IX95 158 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 EMC1Q8N766 993 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 MRIQ9BWK5 157 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 ZNF341Q9BYN7 854 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 ARHGEF4Q9NR80 690 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 WDR35Q9P2L0 1181 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 PPARGC1AQ9UBK2 798 aaKnown RBP14.63□□□□□ -0.07
CCDC57-203ENST00000392343 CYB561D2O14569 222 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 TM9SF1O15321 606 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 ITGBL1O95965 494 aaPredicted RBP14.63□□□□□ -0.07
CCDC57-203ENST00000392343 SERPINB4P48594 390 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 HIRAP54198 1017 aaPredicted RBP14.63□□□□□ -0.07
CCDC57-203ENST00000392343 SLC35B2Q8TB61 432 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 ZNF398Q8TD17 642 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 FGD4Q96M96 766 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 THTPAQ9BU02 230 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 ANKEF1Q9NU02 776 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 HERC5Q9UII4 1024 aaKnown RBP14.63□□□□□ -0.07
CCDC57-203ENST00000392343 MTO1Q9Y2Z2 717 aaKnown RBP14.63□□□□□ -0.07
CCDC57-203ENST00000392343 KBTBD13C9JR72 458 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 MAP3K6O95382 1288 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 WEE2P0C1S8 567 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 RARBP10826 455 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 GARTP22102 1010 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 RFC1P35251 1148 aaPredicted RBP14.63□□□□□ -0.07
CCDC57-203ENST00000392343 AP1B1Q10567 949 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 PSMD6Q15008 389 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 KLHL38Q2WGJ6 581 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 NPNTQ6UXI9 565 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 SAMD3Q8N6K7 520 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 RBM15BQ8NDT2 890 aaKnown RBP14.63□□□□□ -0.07
CCDC57-203ENST00000392343 CFAP61Q8NHU2 1237 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 JOSD2Q8TAC2 188 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 SH3TC2Q8TF17 1288 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 NKD2Q969F2 451 aaPredicted RBP14.63□□□□□ -0.07
CCDC57-203ENST00000392343 CFAP36Q96G28 342 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 VCPIP1Q96JH7 1222 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 NTPCRQ9BSD7 190 aaKnown RBP14.63□□□□□ -0.07
CCDC57-203ENST00000392343 TARS2Q9BW92 718 aaKnown RBP14.63□□□□□ -0.07
CCDC57-203ENST00000392343 TRIM4Q9C037 500 aa14.63□□□□□ -0.07
CCDC57-203ENST00000392343 STX18Q9P2W9 335 aaKnown RBP14.63□□□□□ -0.07
CCDC57-203ENST00000392343 TCRBV9S1A1TA0A576 114 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 PTGER2P43116 358 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 IRX4P78413 519 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 OCRLQ01968 901 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 ROR2Q01974 943 aaKnown RBP14.62□□□□□ -0.07
CCDC57-203ENST00000392343 ORC1Q13415 861 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 HSF5Q4G112 596 aaPredicted RBP14.62□□□□□ -0.07
CCDC57-203ENST00000392343 CMPK2Q5EBM0 449 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 ARHGEF16Q5VV41 709 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 CES4AQ5XG92 561 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 GPAT2Q6NUI2 795 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 TRIM72Q6ZMU5 477 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 ARID3BQ8IVW6 561 aaPredicted RBP14.62□□□□□ -0.07
CCDC57-203ENST00000392343 KIAA0319LQ8IZA0 1049 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 PDIK1LQ8N165 341 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 GALNT15Q8N3T1 639 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 TIPINQ9BVW5 301 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 TMOD2Q9NZR1 351 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 PCDHA10Q9Y5I2 948 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 LRRIQ4A6NIV6 560 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 INHBAP08476 426 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 PSMA2P25787 234 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 ETV4P43268 484 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 ALDH18A1P54886 795 aaKnown RBP14.62□□□□□ -0.07
CCDC57-203ENST00000392343 NCOA4Q13772 614 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 IZUMO2Q6UXV1 221 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 WDTC1Q8N5D0 677 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 PPM1NQ8N819 430 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 HSPH1Q92598 858 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 ACAP3Q96P50 834 aa14.62□□□□□ -0.07
CCDC57-203ENST00000392343 ZNF184Q99676 751 aaPredicted RBP14.62□□□□□ -0.07
CCDC57-203ENST00000392343 TRIM56Q9BRZ2 755 aaKnown RBP14.62□□□□□ -0.07
CCDC57-203ENST00000392343 DHRS4Q9BTZ2 278 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms