RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ABRAQ8N0Z2 381 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 KLHL4Q9C0H6 718 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 AKAP12Q02952 1782 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 MCL1Q07820 350 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 SLC35G1Q2M3R5 365 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 MASTLQ96GX5 879 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 ZNF212Q9UDV6 495 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 APPL1Q9UKG1 709 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 SERPINB5P36952 375 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 TKFCQ3LXA3 575 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 FASTKD1Q53R41 847 aaKnown RBP13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 POTEAQ6S8J7 498 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 ZFPM1Q8IX07 1006 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 GCOM2Q9BZD3 368 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 SNX25Q9H3E2 840 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 ARHGAP26Q9UNA1 814 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 LZTS1Q9Y250 596 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 SLIT3O75094 1523 aa13.69□□□□□ -0.22
TRAPPC9-201ENST00000389328 A8MXQ7 604 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 FKBP6O75344 327 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 STIP1P31948 543 aaKnown RBP13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 EFTUD2Q15029 972 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 SLC1A5Q15758 541 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 CYP4X1Q8N118 509 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 CATSPER1Q8NEC5 780 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 MPP4Q96JB8 637 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 NIF3L1Q9GZT8 377 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 ARL8BQ9NVJ2 186 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 E9PBE3 544 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 KLHL41O60662 606 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 ADRB2P07550 413 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 NR3C2P08235 984 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 JAM2P57087 298 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 RPS6P62753 249 aaKnown RBP13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 SGSM1Q2NKQ1 1148 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 HYIQ5T013 277 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 TMC2Q8TDI7 906 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 C2orf71A6NGG8 1288 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 SMAPO00193 183 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 SOX11P35716 441 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 MRPS9P82933 396 aaKnown RBP13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 EMC2Q15006 297 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 XKR3Q5GH77 459 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 FAM47CQ5HY64 1035 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 DCAF12L1Q5VU92 463 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 GPATCH2LQ9NWQ4 482 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 WDR35Q9P2L0 1181 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 SOX13Q9UN79 622 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 MRC1P22897 1456 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 M0R2N6 131 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 GNGT2O14610 69 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 APBA3O96018 575 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 GABPAQ06546 454 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 KBTBD12Q3ZCT8 623 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 CLNKQ7Z7G1 428 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 GDPD5Q8WTR4 605 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 ZNF606Q8WXB4 792 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 APOPT1Q96IL0 206 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 ARHGEF3Q9NR81 526 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 ANKEF1Q9NU02 776 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 STXBP5LQ9Y2K9 1186 aa13.68□□□□□ -0.22
TRAPPC9-201ENST00000389328 NFAT5O94916 1531 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 R3HDM1Q15032 1099 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 HABP4Q5JVS0 413 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 LAYNQ6UX15 382 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 RFWD2Q8NHY2 731 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 SHC3Q92529 594 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 CCDC134Q9H6E4 229 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 AVENQ9NQS1 362 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 FBXO40Q9UH90 709 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 STXBP2Q15833 593 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 BMT2Q1RMZ1 405 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 RC3H1Q5TC82 1133 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 DCAF15Q66K64 600 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 RNF148Q8N7C7 305 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 TMEM109Q9BVC6 243 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 ING2Q9H160 280 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 SIX2Q9NPC8 291 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 C2CD2LO14523 706 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 SRGAP2BP0DMP2 458 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 TAS2R40P59535 323 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 KHDC1Q4VXA5 237 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 VSTM1Q6UX27 236 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 SIX6OS1Q8N1H7 587 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 MTMR12Q9C0I1 747 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 ZNF277Q9NRM2 450 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 CLIC5Q9NZA1 410 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 SLC17A7Q9P2U7 560 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 CHKBQ9Y259 395 aa13.67□□□□□ -0.22
TRAPPC9-201ENST00000389328 NFIBO00712 420 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 PGM3O95394 542 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 PROCP04070 461 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 KCNA4P22459 653 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 FOXN2P32314 431 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 SLC25A3Q00325 362 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 TBCCQ15814 346 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 ZNF570Q96NI8 536 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 GCNAQ96QF7 691 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 EBF2Q9HAK2 575 aa13.66□□□□□ -0.22
TRAPPC9-201ENST00000389328 IL1RAPL1Q9NZN1 696 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms