RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 CTCFP49711 727 aaPredicted RBP12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 CACHD1Q5VU97 1274 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 NAPEPLDQ6IQ20 393 aa12.79□□□□□ -0.36
KCNQ3-201ENST00000388996 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 PSMA4P25789 261 aaKnown RBP12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 OR1G1P47890 313 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 BRD8Q9H0E9 1235 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 ALDH1A2O94788 518 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 ENO3P13929 434 aaPredicted RBP12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 UBE2OQ9C0C9 1292 aaKnown RBP12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 DPEP1P16444 411 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 PTGER2P43116 358 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 KCNK10P57789 538 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 CCZ1BP86790 482 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 CCZ1P86791 482 aaPredicted RBP12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 BOLA3Q53S33 107 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 SH2D3CQ8N5H7 860 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 C6orf203Q9P0P8 240 aaPredicted RBP12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 PRR23D1E9PI22 279 aaPredicted RBP12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 PRR23D2P0DMB1 279 aaPredicted RBP12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 ZSWIM1Q9BR11 485 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 ADAM33Q9BZ11 813 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 TRMT6Q9UJA5 497 aaKnown RBP12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 RAD51CO43502 376 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 PPP1R37O75864 691 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 WDR47O94967 919 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 ITGB3P05106 788 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 TMEM253P0C7T8 217 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 VPS33BQ9H267 617 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 DDIT4Q9NX09 232 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 CSE1LP55060 971 aaKnown RBP12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 GEMIN4P57678 1058 aaKnown RBP12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 ZNF484Q5JVG2 852 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 UNC45BQ8IWX7 931 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 BLOC1S5Q8TDH9 187 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 TUBE1Q9UJT0 475 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 IFNEQ86WN2 208 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 CD302Q8IX05 232 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 SDR42E2A6NKP2 422 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 FAM107AO95990 144 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 SOAT1P35610 550 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 FBXO21O94952 628 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 BLVRAP53004 296 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 ZNF177Q13360 481 aaPredicted RBP12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 FBXO32Q969P5 355 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 TRIM10Q9UDY6 481 aa12.78□□□□□ -0.36
KCNQ3-201ENST00000388996 NOTCH3Q9UM47 2321 aa12.77□□□□□ -0.36
KCNQ3-201ENST00000388996 F5H5T6 163 aa12.77□□□□□ -0.36
KCNQ3-201ENST00000388996 GSNP06396 782 aa12.77□□□□□ -0.36
KCNQ3-201ENST00000388996 ZNF286BP0CG31 522 aa12.77□□□□□ -0.36
KCNQ3-201ENST00000388996 PLOD1Q02809 727 aaPredicted RBP12.77□□□□□ -0.36
KCNQ3-201ENST00000388996 CHI3L2Q15782 390 aa12.77□□□□□ -0.36
KCNQ3-201ENST00000388996 ADGRF2Q8IZF7 708 aa12.77□□□□□ -0.36
KCNQ3-201ENST00000388996 BHMTQ93088 406 aa12.77□□□□□ -0.36
KCNQ3-201ENST00000388996 ITPK1Q13572 414 aa12.77□□□□□ -0.36
KCNQ3-201ENST00000388996 TMEM132BQ14DG7 1078 aa12.77□□□□□ -0.36
KCNQ3-201ENST00000388996 DAB2IPQ5VWQ8 1189 aa12.77□□□□□ -0.36
KCNQ3-201ENST00000388996 TRPM8Q7Z2W7 1104 aa12.77□□□□□ -0.36
KCNQ3-201ENST00000388996 CACNA1IQ9P0X4 2223 aa12.77□□□□□ -0.36
KCNQ3-201ENST00000388996 ATP6V0D2Q8N8Y2 350 aa12.77□□□□□ -0.36
KCNQ3-201ENST00000388996 VPS26AO75436 327 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 EGFRP00533 1210 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 FAM83EQ2M2I3 478 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 E4F1Q66K89 784 aaPredicted RBP12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 C11orf96Q7Z7L8 435 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 ZCWPW1Q9H0M4 648 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 MANSC1Q9H8J5 431 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 TRIM49D1C9J1S8 452 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 DGKIO75912 1065 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 STAG3L1P0CL83 205 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 RIBC1Q8N443 379 aaPredicted RBP12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 SMARCAL1Q9NZC9 954 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 MYH7BA7E2Y1 1941 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 SOAT2O75908 522 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 RHOBTB1O94844 696 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 UGT3A1Q6NUS8 523 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 FBXO16Q8IX29 292 aaPredicted RBP12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 ELOA2Q8IYF1 753 aaPredicted RBP12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 HOXA2O43364 376 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 LRRC71Q8N4P6 559 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 JADE3Q92613 823 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 PRPF18Q99633 342 aaKnown RBP12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 PDGFCQ9NRA1 345 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 SPASTQ9UBP0 616 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 ZNF407Q9C0G0 2248 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 AMHR2Q16671 573 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 KBTBD12Q3ZCT8 623 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 ANKRD13AQ8IZ07 590 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 CARD9Q9H257 536 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 IPPQ9Y573 584 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 CAND2O75155 1236 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 UBE3AQ05086 875 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 CLEC4FQ8N1N0 589 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 UCMAQ8WVF2 138 aa12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 UBQLN1Q9UMX0 589 aaKnown RBP12.77□□□□□ -0.37
KCNQ3-201ENST00000388996 C2orf81A6NN90 581 aa12.76□□□□□ -0.37
KCNQ3-201ENST00000388996 FKBP9O95302 570 aa12.76□□□□□ -0.37
KCNQ3-201ENST00000388996 FKBP9P1Q75LS8 142 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms