RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 R3HDM1Q15032 1099 aaKnown RBP15.7■□□□□ 0.1
SCFD2-201ENST00000388940 TMED2Q15363 201 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 NUGGCQ68CJ6 796 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 PPIL6Q8IXY8 311 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 GRAMD1AQ96CP6 724 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 PDZD7Q9H5P4 517 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 SMYD3Q9H7B4 428 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 PDGFCQ9NRA1 345 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 METTL5Q9NRN9 209 aaKnown RBP15.7■□□□□ 0.1
SCFD2-201ENST00000388940 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.7■□□□□ 0.1
SCFD2-201ENST00000388940 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.7■□□□□ 0.1
SCFD2-201ENST00000388940 INSRRP14616 1297 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 PCK1P35558 622 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 IL9RQ01113 521 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 ARHGAP1Q07960 439 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 FASTKD3Q14CZ7 662 aaKnown RBP15.7■□□□□ 0.1
SCFD2-201ENST00000388940 TTC39CQ8N584 583 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 DENND1AQ8TEH3 1009 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 TGS1Q96RS0 853 aaKnown RBP15.7■□□□□ 0.1
SCFD2-201ENST00000388940 SYNCQ9H7C4 482 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 PRKAG3Q9UGI9 489 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 KIAA1257Q9ULG3 409 aa15.7■□□□□ 0.1
SCFD2-201ENST00000388940 COL1A2P08123 1366 aa15.69■□□□□ 0.1
SCFD2-201ENST00000388940 A0A087WZ62 844 aa15.69■□□□□ 0.1
SCFD2-201ENST00000388940 RNF8O76064 485 aa15.69■□□□□ 0.1
SCFD2-201ENST00000388940 TRUB2O95900 331 aaKnown RBP15.69■□□□□ 0.1
SCFD2-201ENST00000388940 IFNB1P01574 187 aa15.69■□□□□ 0.1
SCFD2-201ENST00000388940 INCA1Q0VD86 236 aa15.69■□□□□ 0.1
SCFD2-201ENST00000388940 PDIA2Q13087 525 aaKnown RBP15.69■□□□□ 0.1
SCFD2-201ENST00000388940 SLC10A6Q3KNW5 377 aa15.69■□□□□ 0.1
SCFD2-201ENST00000388940 SWT1Q5T5J6 900 aaKnown RBP15.69■□□□□ 0.1
SCFD2-201ENST00000388940 ZBED8Q8IZ13 594 aa15.69■□□□□ 0.1
SCFD2-201ENST00000388940 GBP7Q8N8V2 638 aaPredicted RBP15.69■□□□□ 0.1
SCFD2-201ENST00000388940 NAT8LQ8N9F0 302 aa15.69■□□□□ 0.1
SCFD2-201ENST00000388940 GDAP1Q8TB36 358 aa15.69■□□□□ 0.1
SCFD2-201ENST00000388940 ZBTB10Q96DT7 871 aa15.69■□□□□ 0.1
SCFD2-201ENST00000388940 FDXACB1Q9BRP7 624 aaPredicted RBP15.69■□□□□ 0.1
SCFD2-201ENST00000388940 ASNSD1Q9NWL6 643 aa15.69■□□□□ 0.1
SCFD2-201ENST00000388940 ZMYND8Q9ULU4 1186 aaPredicted RBP15.69■□□□□ 0.1
SCFD2-201ENST00000388940 SMG5Q9UPR3 1016 aaKnown RBP15.69■□□□□ 0.1
SCFD2-201ENST00000388940 ARL2BPQ9Y2Y0 163 aa15.69■□□□□ 0.1
SCFD2-201ENST00000388940 E7ESA3 106 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 APOC4-APOC2K7ER74 178 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 ATP2C2O75185 946 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 ENDOD1O94919 500 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 APOC2P02655 101 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 LGALS2P05162 132 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 CTCFP49711 727 aaPredicted RBP15.68■□□□□ 0.1
SCFD2-201ENST00000388940 ARL4CP56559 192 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 HIF1AQ16665 826 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 SMTNL2Q2TAL5 461 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 GALNTL6Q49A17 601 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 ZC3H12AQ5D1E8 599 aaKnown RBP15.68■□□□□ 0.1
SCFD2-201ENST00000388940 EFHC2Q5JST6 749 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 CYB5D1Q6P9G0 228 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 SPATA21Q7Z572 469 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 NT5DC4Q86YG4 428 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 EMC1Q8N766 993 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 KCTD6Q8NC69 237 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 CPT1BQ92523 772 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 MIS12Q9H081 205 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 VPS37BQ9H9H4 285 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 MLXIPLQ9NP71 852 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 HAUS2Q9NVX0 235 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 HMGXB4Q9UGU5 601 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 PLXNA1Q9UIW2 1896 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 ITGA11Q9UKX5 1188 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 ASMTLO95671 621 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 TSHRP16473 764 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 TAC1P20366 129 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 MIPP30301 263 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 RPL22P35268 128 aaKnown RBP15.68■□□□□ 0.1
SCFD2-201ENST00000388940 ZNF143P52747 638 aaPredicted RBP15.68■□□□□ 0.1
SCFD2-201ENST00000388940 WDR4P57081 412 aaKnown RBP15.68■□□□□ 0.1
SCFD2-201ENST00000388940 DYNLT1P63172 113 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 MTFR1Q15390 333 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 KCNT1Q5JUK3 1230 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 RGS9BPQ6ZS82 235 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 ARMCX2Q7L311 632 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 RSAD2Q8WXG1 361 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 HPDLQ96IR7 371 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 TRABDQ9H4I3 376 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 RSAD1Q9HA92 442 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 SSU72Q9NP77 194 aaKnown RBP15.68■□□□□ 0.1
SCFD2-201ENST00000388940 ABCF3Q9NUQ8 709 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 BARX2Q9UMQ3 279 aaPredicted RBP15.68■□□□□ 0.1
SCFD2-201ENST00000388940 USP18Q9UMW8 372 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 C2CD2Q9Y426 696 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 CITO14578 2027 aa15.68■□□□□ 0.1
SCFD2-201ENST00000388940 RBM47A0AV96 593 aaKnown RBP15.67■□□□□ 0.1
SCFD2-201ENST00000388940 CFAP73A6NFT4 308 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 M0QYV0 167 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 ARF4P18085 180 aaPredicted RBP15.67■□□□□ 0.1
SCFD2-201ENST00000388940 PHBP35232 272 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 GDF10P55107 478 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 GPX6P59796 221 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 ACVR2BQ13705 512 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 TMEM132DQ14C87 1099 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 TAPT1Q6NXT6 567 aa15.67■□□□□ 0.1
SCFD2-201ENST00000388940 ILDR2Q71H61 639 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms