RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 FBXO36Q8NEA4 188 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 PAFAH2Q99487 392 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 POLIQ9UNA4 740 aa17.12■□□□□ 0.33
VPS16-203ENST00000380469 LCTP09848 1927 aa17.11■□□□□ 0.33
VPS16-203ENST00000380469 GAS2O43903 313 aaKnown RBP17.11■□□□□ 0.33
VPS16-203ENST00000380469 KRT19P08727 400 aa17.11■□□□□ 0.33
VPS16-203ENST00000380469 TARSP26639 723 aaKnown RBP17.11■□□□□ 0.33
VPS16-203ENST00000380469 PSMC4P43686 418 aa17.11■□□□□ 0.33
VPS16-203ENST00000380469 CLNS1AP54105 237 aaKnown RBP17.11■□□□□ 0.33
VPS16-203ENST00000380469 GAD2Q05329 585 aa17.11■□□□□ 0.33
VPS16-203ENST00000380469 TAZQ16635 292 aa17.11■□□□□ 0.33
VPS16-203ENST00000380469 MPZL3Q6UWV2 235 aa17.11■□□□□ 0.33
VPS16-203ENST00000380469 APOBEC3FQ8IUX4 373 aaKnown RBP17.11■□□□□ 0.33
VPS16-203ENST00000380469 INPP5DQ92835 1189 aa17.11■□□□□ 0.33
VPS16-203ENST00000380469 ALKBH8Q96BT7 664 aaKnown RBP17.11■□□□□ 0.33
VPS16-203ENST00000380469 KLRG1Q96E93 195 aa17.11■□□□□ 0.33
VPS16-203ENST00000380469 XPO7Q9UIA9 1087 aaKnown RBP17.11■□□□□ 0.33
VPS16-203ENST00000380469 HAO1Q9UJM8 370 aa17.11■□□□□ 0.33
VPS16-203ENST00000380469 TM9SF1O15321 606 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 B4GALT4O60513 344 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 TGFB3P10600 412 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 TSHRP16473 764 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 EIF3EP60228 445 aaKnown RBP17.1■□□□□ 0.33
VPS16-203ENST00000380469 OSTNP61366 133 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 EFTUD2Q15029 972 aaKnown RBP eCLIP17.1■□□□□ 0.331e-6■■■■□ 20.2
VPS16-203ENST00000380469 BBS9Q3SYG4 887 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 ZNF667Q5HYK9 610 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 ANGEL2Q5VTE6 544 aaKnown RBP17.1■□□□□ 0.33
VPS16-203ENST00000380469 OTOAQ7RTW8 1153 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 TAB3Q8N5C8 712 aaPredicted RBP17.1■□□□□ 0.33
VPS16-203ENST00000380469 C10orf82Q8WW14 230 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 METTL5Q9NRN9 209 aaKnown RBP17.1■□□□□ 0.33
VPS16-203ENST00000380469 PCSK1NQ9UHG2 260 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 CYTH4Q9UIA0 394 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 AFG3L2Q9Y4W6 797 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 E7ESA3 106 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 ABLIM1O14639 778 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 MCF2LO15068 1137 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 RNF8O76064 485 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 TROVE2P10155 538 aaKnown RBP eCLIP17.1■□□□□ 0.33
VPS16-203ENST00000380469 MARK3P27448 753 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 ATF7IP2Q5U623 682 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 METTL7BQ6UX53 244 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 TSHZ1Q6ZSZ6 1077 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 XYLT1Q86Y38 959 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 UNC45BQ8IWX7 931 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 KIAA0319LQ8IZA0 1049 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 LRRC71Q8N4P6 559 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 FAM71DQ8N9W8 422 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 TMEM237Q96Q45 408 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 DHRS4Q9BTZ2 278 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 TJP2Q9UDY2 1190 aa17.1■□□□□ 0.33
VPS16-203ENST00000380469 APOC4-APOC2K7ER74 178 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 APOC2P02655 101 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 RAP1GAPP47736 663 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 RNASELQ05823 741 aaKnown RBP17.09■□□□□ 0.33
VPS16-203ENST00000380469 EMC1Q8N766 993 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 HSPH1Q92598 858 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 CPXM1Q96SM3 734 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 WDR91A4D1P6 747 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 DIAPH2O60879 1101 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 CD48P09326 243 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 ADRA1DP25100 572 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 RAD23BP54727 409 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 BASP1P80723 227 aaKnown RBP17.09■□□□□ 0.33
VPS16-203ENST00000380469 ACAP1Q15027 740 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 SLC45A4Q5BKX6 768 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 SPDYAQ5MJ70 313 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 WDR78Q5VTH9 848 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 CCDC125Q86Z20 511 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 CMASQ8NFW8 434 aaPredicted RBP17.09■□□□□ 0.33
VPS16-203ENST00000380469 ZNF398Q8TD17 642 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 UTP4Q969X6 686 aaKnown RBP17.09■□□□□ 0.33
VPS16-203ENST00000380469 CYTH2Q99418 400 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 CALN1Q9BXU9 219 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 RPF1Q9H9Y2 349 aaKnown RBP17.09■□□□□ 0.33
VPS16-203ENST00000380469 NPHS2Q9NP85 383 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 CYLDQ9NQC7 956 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 IKBKGQ9Y6K9 419 aa17.09■□□□□ 0.33
VPS16-203ENST00000380469 TCRBV7S3A2A0A539 114 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 SOWAHBA6NEL2 793 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 NFKBIEO00221 500 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 ACKR2O00590 384 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 IL18RAPO95256 599 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 PROZP22891 400 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 EDNRBP24530 442 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 MIPP30301 263 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 DPYSL3Q14195 570 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 LY6KQ17RY6 165 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 TCP10LQ8TDR4 215 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 DCAKDQ8WVC6 231 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 VPS11Q9H270 941 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 RSAD1Q9HA92 442 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 ASNSD1Q9NWL6 643 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 ZFP69BQ9UJL9 534 aa17.08■□□□□ 0.33
VPS16-203ENST00000380469 IQANK1A0A1B0GTG1 560 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 INO80B-WBP1J3KQ70 363 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 C2CD2LO14523 706 aa17.08■□□□□ 0.32
VPS16-203ENST00000380469 TRUB2O95900 331 aaKnown RBP17.08■□□□□ 0.32
VPS16-203ENST00000380469 MT-ND3P03897 115 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms