RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 SEC24CP53992 1094 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 TNFAIP8L3Q5GJ75 292 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 TXNRD3NBQ6F5E7 133 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 ZCCHC9Q8N567 271 aaKnown RBP13.26□□□□□ -0.29
VPS16-202ENST00000380445 BEST2Q8NFU1 509 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 EPS8L3Q8TE67 593 aaKnown RBP13.26□□□□□ -0.29
VPS16-202ENST00000380445 SGSM3Q96HU1 749 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 PTPN18Q99952 460 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 ZWILCHQ9H900 591 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 LRRC4CQ9HCJ2 640 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 GINS2Q9Y248 185 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 CITO14578 2027 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 TCEA3O75764 348 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 CELF2O95319 508 aaKnown RBP13.26□□□□□ -0.29
VPS16-202ENST00000380445 KDELR1P24390 212 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 PCK1P35558 622 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 ARSEP51690 589 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 AUHQ13825 339 aaKnown RBP13.26□□□□□ -0.29
VPS16-202ENST00000380445 OASLQ15646 514 aaKnown RBP13.26□□□□□ -0.29
VPS16-202ENST00000380445 FAM102AQ5T9C2 384 aaPredicted RBP13.26□□□□□ -0.29
VPS16-202ENST00000380445 PCGF5Q86SE9 256 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 LRRC52Q8N7C0 313 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 TRIM6Q9C030 488 aaPredicted RBP13.26□□□□□ -0.29
VPS16-202ENST00000380445 DNAI2Q9GZS0 605 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 FAM49AQ9H0Q0 323 aaPredicted RBP13.26□□□□□ -0.29
VPS16-202ENST00000380445 TJP2Q9UDY2 1190 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 GGA2Q9UJY4 613 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 TSPAN16Q9UKR8 245 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 TPX2Q9ULW0 747 aaKnown RBP13.26□□□□□ -0.29
VPS16-202ENST00000380445 FAM169AQ9Y6X4 670 aa13.26□□□□□ -0.29
VPS16-202ENST00000380445 ZNF236Q9UL36 1845 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 GPR32O75388 356 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 SMIM10L2AP0DMW4 78 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 SMIM10L2BP0DMW5 78 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 DESP17661 470 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 HOXA11P31270 313 aaPredicted RBP13.25□□□□□ -0.29
VPS16-202ENST00000380445 KYNUQ16719 465 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 DPH6Q7L8W6 267 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 KCTD6Q8NC69 237 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 SNX27Q96L92 541 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 TSPAN18Q96SJ8 248 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 SELENOSQ9BQE4 189 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 DDX23Q9BUQ8 820 aaKnown RBP13.25□□□□□ -0.29
VPS16-202ENST00000380445 PCDH9Q9HC56 1237 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 SNTG2Q9NY99 539 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 ATXN2Q99700 1313 aaKnown RBP13.25□□□□□ -0.29
VPS16-202ENST00000380445 MBLAC1A4D2B0 266 aaPredicted RBP13.25□□□□□ -0.29
VPS16-202ENST00000380445 C3orf70A6NLC5 250 aaPredicted RBP13.25□□□□□ -0.29
VPS16-202ENST00000380445 SETSIPP0DME0 302 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 CYP2C9P11712 490 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 SLCO1A2P46721 670 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 ZNF143P52747 638 aaPredicted RBP13.25□□□□□ -0.29
VPS16-202ENST00000380445 MAP2K5Q13163 448 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 STAT4Q14765 748 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 MORF4L2Q15014 288 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 BBS12Q6ZW61 710 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 ARFGAP1Q8N6T3 406 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 EMC1Q8N766 993 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 CMASQ8NFW8 434 aaPredicted RBP13.25□□□□□ -0.29
VPS16-202ENST00000380445 TTC25Q96NG3 672 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 CNPY3Q9BT09 278 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 USP18Q9UMW8 372 aa13.25□□□□□ -0.29
VPS16-202ENST00000380445 GNEQ9Y223 722 aaKnown RBP13.25□□□□□ -0.29
VPS16-202ENST00000380445 SGK1O00141 431 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 XPOTO43592 962 aaKnown RBP13.24□□□□□ -0.29
VPS16-202ENST00000380445 DARSP14868 501 aaKnown RBP13.24□□□□□ -0.29
VPS16-202ENST00000380445 GPD1P21695 349 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 IFI35P80217 286 aaPredicted RBP13.24□□□□□ -0.29
VPS16-202ENST00000380445 GPS1Q13098 491 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 TAZQ16635 292 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 UNC93AQ86WB7 457 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 SLC35B2Q8TB61 432 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 UBA3Q8TBC4 463 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 ACSF2Q96CM8 615 aaPredicted RBP13.24□□□□□ -0.29
VPS16-202ENST00000380445 RBM15Q96T37 977 aaKnown RBP eCLIP13.24□□□□□ -0.29
VPS16-202ENST00000380445 RSAD1Q9HA92 442 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 NINJ2Q9NZG7 142 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 SNX9Q9Y5X1 595 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 CST8O60676 142 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 KIAA0754O94854 1291 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 IL1R2P27930 398 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 MIPP30301 263 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 CPT1AP50416 773 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 TMEM62Q0P6H9 643 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 ZBTB6Q15916 424 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 LONRF1Q17RB8 773 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 SMTNL2Q2TAL5 461 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 MORN1Q5T089 497 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 ERMARDQ5T6L9 678 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 OR6B2Q6IFH4 312 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 TLK2Q86UE8 772 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 CFAP57Q96MR6 1250 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 XPO6Q96QU8 1125 aaKnown RBP13.24□□□□□ -0.29
VPS16-202ENST00000380445 HESX1Q9UBX0 185 aa13.24□□□□□ -0.29
VPS16-202ENST00000380445 ADCY6O43306 1168 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 TRUB2O95900 331 aaKnown RBP13.23□□□□□ -0.29
VPS16-202ENST00000380445 CD4P01730 458 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 ABHD2P08910 425 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 CHN1P15882 459 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 HNRNPH1P31943 449 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms