RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 ZNF669Q96BR6 464 aaPredicted RBP13.76□□□□□ -0.21
NPHP4-203ENST00000378169 GRAMD1AQ96CP6 724 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 KLRG1Q96E93 195 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 AMPD2Q01433 879 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 CAPSQ13938 189 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 TRADDQ15628 312 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 NFIL3Q16649 462 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 LLGL2Q6P1M3 1020 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 LRRC6Q86X45 466 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 AENQ8WTP8 325 aaKnown RBP13.76□□□□□ -0.21
NPHP4-203ENST00000378169 SHC3Q92529 594 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 GLT1D1Q96MS3 346 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 APOL2Q9BQE5 337 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 PNPLA4P41247 253 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 PDK1Q15118 436 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 HSDL1Q3SXM5 330 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 RASIP1Q5U651 963 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 TRPM8Q7Z2W7 1104 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 TMC3Q7Z5M5 1100 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 SLC9A9Q8IVB4 645 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 ATPAF2Q8N5M1 289 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 CDC26Q8NHZ8 85 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 TTC8Q8TAM2 541 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 SCG3Q8WXD2 468 aaKnown RBP13.76□□□□□ -0.21
NPHP4-203ENST00000378169 TTC1Q99614 292 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 CEP41Q9BYV8 373 aa13.76□□□□□ -0.21
NPHP4-203ENST00000378169 LSM8O95777 96 aaKnown RBP13.75□□□□□ -0.21
NPHP4-203ENST00000378169 SNRPAP09012 282 aaKnown RBP13.75□□□□□ -0.21
NPHP4-203ENST00000378169 TAC1P20366 129 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 PTGER2P43116 358 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 KIF19Q2TAC6 998 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 TREML2Q5T2D2 321 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 RIOX2Q8IUF8 465 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 KIAA0319LQ8IZA0 1049 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 ZNF512Q96ME7 567 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-203ENST00000378169 SERPINB12Q96P63 405 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 PRKAG2Q9UGJ0 569 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 DNPEPQ9ULA0 475 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 MRPL42Q9Y6G3 142 aaKnown RBP13.75□□□□□ -0.21
NPHP4-203ENST00000378169 NID2Q14112 1375 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 IGLV3-22A0A075B6J6 115 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 CASTOR2A6NHX0 329 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 NOL4O94818 638 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 LGALS2P05162 132 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 GCKP35557 465 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 CLK2P49760 499 aaKnown RBP13.75□□□□□ -0.21
NPHP4-203ENST00000378169 YWHAHQ04917 246 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-203ENST00000378169 BMT2Q1RMZ1 405 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 C1orf146Q5VVC0 180 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 TDRD10Q5VZ19 366 aaKnown RBP13.75□□□□□ -0.21
NPHP4-203ENST00000378169 FAM71AQ8IYT1 594 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 ADGRF2Q8IZF7 708 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 ZSWIM2Q8NEG5 633 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 RMDN2Q96LZ7 410 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 INPP4AQ96PE3 977 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-203ENST00000378169 ABHD16BQ9H3Z7 469 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 NOP53Q9NZM5 478 aaKnown RBP13.75□□□□□ -0.21
NPHP4-203ENST00000378169 SALL4Q9UJQ4 1053 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 TTC4O95801 387 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 ZSCAN5DPP0CG00 497 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 ALDH18A1P54886 795 aaKnown RBP13.75□□□□□ -0.21
NPHP4-203ENST00000378169 COBLL1Q53SF7 1204 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 HGSNATQ68CP4 663 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 FBXO41Q8TF61 875 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 FAM111AQ96PZ2 611 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 KLC4Q9NSK0 619 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 WHRNQ9P202 907 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 EPS15L1Q9UBC2 864 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 NEMP1O14524 444 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 B4GALT5O43286 388 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 PMPCBO75439 489 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 RGS2P41220 211 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 MAP3K7CLP57077 242 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 FMO1Q01740 532 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 MCL1Q07820 350 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 PRAMEF19Q5SWL8 479 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 DENND5BQ6ZUT9 1274 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 MIB1Q86YT6 1006 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 ARMC2Q8NEN0 867 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 MAGEB5Q9BZ81 275 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 KIAA1257Q9ULG3 409 aa13.75□□□□□ -0.21
NPHP4-203ENST00000378169 BARX2Q9UMQ3 279 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-203ENST00000378169 RGPD1P0DJD0 1748 aa13.74□□□□□ -0.21
NPHP4-203ENST00000378169 GEMIN4P57678 1058 aaKnown RBP13.74□□□□□ -0.21
NPHP4-203ENST00000378169 IFI35P80217 286 aaPredicted RBP13.74□□□□□ -0.21
NPHP4-203ENST00000378169 ZNF844Q08AG5 666 aa13.74□□□□□ -0.21
NPHP4-203ENST00000378169 EEF1DP3Q658K8 133 aa13.74□□□□□ -0.21
NPHP4-203ENST00000378169 SLC25A41Q8N5S1 370 aa13.74□□□□□ -0.21
NPHP4-203ENST00000378169 ALG3Q92685 438 aa13.74□□□□□ -0.21
NPHP4-203ENST00000378169 SEMA4DQ92854 862 aa13.74□□□□□ -0.21
NPHP4-203ENST00000378169 BHMTQ93088 406 aa13.74□□□□□ -0.21
NPHP4-203ENST00000378169 DCLK3Q9C098 648 aa13.74□□□□□ -0.21
NPHP4-203ENST00000378169 MAP2K7O14733 419 aa13.74□□□□□ -0.21
NPHP4-203ENST00000378169 ATP5HO75947 161 aa13.74□□□□□ -0.21
NPHP4-203ENST00000378169 BEX3Q00994 111 aa13.74□□□□□ -0.21
NPHP4-203ENST00000378169 USP10Q14694 798 aaKnown RBP13.74□□□□□ -0.21
NPHP4-203ENST00000378169 ZACNQ401N2 412 aa13.74□□□□□ -0.21
NPHP4-203ENST00000378169 DLK2Q6UY11 383 aa13.74□□□□□ -0.21
NPHP4-203ENST00000378169 PALB2Q86YC2 1186 aa13.74□□□□□ -0.21
NPHP4-203ENST00000378169 WDCPQ9H6R7 721 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms