RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 NCANO14594 1321 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 ATP8B3O60423 1300 aa17.94■□□□□ 0.46
HMGN4-201ENST00000377575 CHADO15335 359 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 ASS1P00966 412 aaKnown RBP17.93■□□□□ 0.46
HMGN4-201ENST00000377575 HLA-DRAP01903 254 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 F11P03951 625 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 TRIM49P0CI25 452 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 TRIM49CP0CI26 452 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 FCHO2Q0JRZ9 810 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 UBXN2BQ14CS0 331 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 C1orf220Q5T0J3 134 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 ZNF852Q6ZMS4 543 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 TMEM150AQ86TG1 271 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 CMTM8Q8IZV2 173 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 CCDC150Q8NCX0 1101 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 CSGALNACT1Q8TDX6 532 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 ATOH1Q92858 354 aaPredicted RBP17.93■□□□□ 0.46
HMGN4-201ENST00000377575 OSBPL6Q9BZF3 934 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 DPEP3Q9H4B8 488 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 KIF9Q9HAQ2 790 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 LTB4R2Q9NPC1 389 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 NME7Q9Y5B8 376 aa17.93■□□□□ 0.46
HMGN4-201ENST00000377575 H0Y858 1186 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 MAN2B1O00754 1011 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 STX10O60499 249 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 PRAMEF12O95522 483 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 DCNP07585 359 aaKnown RBP17.92■□□□□ 0.46
HMGN4-201ENST00000377575 TRIM21P19474 475 aaKnown RBP17.92■□□□□ 0.46
HMGN4-201ENST00000377575 GTF2H1P32780 548 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 PPP1R2P41236 205 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 MAGEA9P43362 315 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 RAP1GAPP47736 663 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 GCLMP48507 274 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 LRRC63Q05C16 580 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 ARHGAP29Q52LW3 1261 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 DENND5BQ6ZUT9 1274 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 CELF5Q8N6W0 485 aaKnown RBP17.92■□□□□ 0.46
HMGN4-201ENST00000377575 MAB21L3Q8N8X9 362 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 BPIFB1Q8TDL5 484 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 ERCC4Q92889 916 aaPredicted RBP17.92■□□□□ 0.46
HMGN4-201ENST00000377575 RSPRY1Q96DX4 576 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 MSANTD3Q96H12 275 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 NELL2Q99435 816 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 SLC46A2Q9BY10 475 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 MMRN2Q9H8L6 949 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 TMEM8AQ9HCN3 771 aa17.92■□□□□ 0.46
HMGN4-201ENST00000377575 PSMA7O14818 248 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 NCAM2O15394 837 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 SLC16A3O15427 465 aaKnown RBP17.91■□□□□ 0.46
HMGN4-201ENST00000377575 ABCB7O75027 752 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 TADA3O75528 432 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 GLULP15104 373 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 ANP32AP39687 249 aaKnown RBP17.91■□□□□ 0.46
HMGN4-201ENST00000377575 CDH8P55286 799 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 NOP14P78316 857 aaKnown RBP17.91■□□□□ 0.46
HMGN4-201ENST00000377575 PLCB2Q00722 1185 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 TXNDC8Q6A555 127 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 C1orf228Q6PIY5 440 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 MON1AQ86VX9 555 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 C8orf48Q96LL4 319 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 BCO2Q9BYV7 579 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 THG1LQ9NWX6 298 aaKnown RBP17.91■□□□□ 0.46
HMGN4-201ENST00000377575 CHMP5Q9NZZ3 219 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 DLGAP2Q9P1A6 1054 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 PIAS3Q9Y6X2 628 aa17.91■□□□□ 0.46
HMGN4-201ENST00000377575 PIEZO1Q92508 2521 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 FAM170BA6NMN3 283 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 F8VP50 259 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 ARNTLO00327 626 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 ATXN8OSP0DMR3 200 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 ASPAP45381 313 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 MXI1P50539 228 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 PDE6CP51160 858 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 MLLT6P55198 1093 aaPredicted RBP17.9■□□□□ 0.46
HMGN4-201ENST00000377575 FKBP3Q00688 224 aaKnown RBP17.9■□□□□ 0.46
HMGN4-201ENST00000377575 PPP3CAQ08209 521 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 ANGPT1Q15389 498 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 KRT39Q6A163 491 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 SPOPLQ6IQ16 392 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 UNC93AQ86WB7 457 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 GPIHBP1Q8IV16 184 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 ADSSL1Q8N142 457 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 TAS1R2Q8TE23 839 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 ELMO3Q96BJ8 720 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 MED10Q9BTT4 135 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 ZNF518BQ9C0D4 1074 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 SDCBP2Q9H190 292 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 TRPC7Q9HCX4 862 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 MYO16Q9Y6X6 1858 aa17.9■□□□□ 0.46
HMGN4-201ENST00000377575 TRAV19A0A0A6YYK7 116 aa17.89■□□□□ 0.45
HMGN4-201ENST00000377575 GADD45BO75293 160 aaPredicted RBP17.89■□□□□ 0.45
HMGN4-201ENST00000377575 CD72P21854 359 aa17.89■□□□□ 0.45
HMGN4-201ENST00000377575 TARSP26639 723 aaKnown RBP17.89■□□□□ 0.45
HMGN4-201ENST00000377575 MCCD1P59942 119 aaPredicted RBP17.89■□□□□ 0.45
HMGN4-201ENST00000377575 ZNF268Q14587 947 aaPredicted RBP17.89■□□□□ 0.45
HMGN4-201ENST00000377575 ZC3H3Q8IXZ2 948 aaKnown RBP17.89■□□□□ 0.45
HMGN4-201ENST00000377575 EEF2KMTQ96G04 330 aa17.89■□□□□ 0.45
HMGN4-201ENST00000377575 SMARCD1Q96GM5 515 aa17.89■□□□□ 0.45
HMGN4-201ENST00000377575 DHTKD1Q96HY7 919 aaPredicted RBP17.89■□□□□ 0.45
HMGN4-201ENST00000377575 TTLL2Q9BWV7 592 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms