RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 CXorf38Q8TB03 319 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 WHAMMQ8TF30 809 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 PIK3R5Q8WYR1 880 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 CALR3Q96L12 384 aaKnown RBP13.16□□□□□ -0.3
VRK3-202ENST00000377011 FBXL18Q96ME1 805 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 POMKQ9H5K3 350 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 MAN1C1Q9NR34 630 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 AGPAT3Q9NRZ7 376 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 RBM12Q9NTZ6 932 aaKnown RBP13.16□□□□□ -0.3
VRK3-202ENST00000377011 NENFQ9UMX5 172 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 TSC2P49815 1807 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 A0A087X0T9 212 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 BUB1O43683 1085 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 FAM228BP0C875 321 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 UCHL3P15374 230 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 MAGEA9P43362 315 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 EXOC3L4Q17RC7 722 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 IRF2BP2Q7Z5L9 587 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 CD302Q8IX05 232 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 RDH13Q8NBN7 331 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 PLEKHO2Q8TD55 490 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 TAF4BQ92750 862 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 CASP10Q92851 521 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 UROC1Q96N76 676 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 RUFY1Q96T51 708 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 MKNK1Q9BUB5 465 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 EMILIN2Q9BXX0 1053 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 SLC38A7Q9NVC3 462 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 TMEM59LQ9UK28 342 aa13.16□□□□□ -0.3
VRK3-202ENST00000377011 TBC1D4O60343 1298 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 SCP2P22307 547 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 SKOR1P84550 965 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 VARS2Q5ST30 1063 aaKnown RBP13.15□□□□□ -0.3
VRK3-202ENST00000377011 EMC10Q5UCC4 262 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 C9orf57Q5W0N0 161 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 SLFN12LQ6IEE8 588 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 BRSK2Q8IWQ3 736 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 GSPT2Q8IYD1 628 aaKnown RBP13.15□□□□□ -0.3
VRK3-202ENST00000377011 OR5B17Q8NGF7 314 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 ACTRT1Q8TDG2 376 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 HDAC7Q8WUI4 952 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 ZNF707Q96C28 371 aaPredicted RBP13.15□□□□□ -0.3
VRK3-202ENST00000377011 BORCS6Q96GS4 357 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 SPAG5Q96R06 1193 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 TMEM209Q96SK2 561 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 POP1Q99575 1024 aaKnown RBP13.15□□□□□ -0.3
VRK3-202ENST00000377011 EPHX3Q9H6B9 360 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 HSPBP1Q9NZL4 362 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 UBQLN1Q9UMX0 589 aaKnown RBP13.15□□□□□ -0.3
VRK3-202ENST00000377011 EXOC7Q9UPT5 735 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 CDY1Q9Y6F8 540 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 NOTCH4Q99466 2003 aa13.15□□□□□ -0.3
VRK3-202ENST00000377011 MYO10Q9HD67 2058 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 DENND4AQ7Z401 1863 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 C19orf67A6NJJ6 358 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 TNFRSF10AO00220 468 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 PIRO00625 290 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 NRG2O14511 850 aaPredicted RBP13.14□□□□□ -0.31
VRK3-202ENST00000377011 NR3C1P04150 777 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 OR4Q2P0C623 313 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 FERP16591 822 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 GARTP22102 1010 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 PON1P27169 355 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 CXCR5P32302 372 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 OR1D2P34982 312 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 CYP2J2P51589 502 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 JAM2P57087 298 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 MRPL58Q14197 206 aaKnown RBP13.14□□□□□ -0.31
VRK3-202ENST00000377011 TMEM132DQ14C87 1099 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 RPS6KA1Q15418 735 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 DNAJC21Q5F1R6 531 aaKnown RBP13.14□□□□□ -0.31
VRK3-202ENST00000377011 STXBP4Q6ZWJ1 553 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 SYCE1Q8N0S2 351 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 C1orf127Q8N9H9 656 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 ST13P5Q8NFI4 369 aaPredicted RBP13.14□□□□□ -0.31
VRK3-202ENST00000377011 ELMO3Q96BJ8 720 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 SUSD3Q96L08 255 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.14□□□□□ -0.31
VRK3-202ENST00000377011 ADAM7Q9H2U9 754 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 RBAKQ9NYW8 714 aaPredicted RBP13.14□□□□□ -0.31
VRK3-202ENST00000377011 FNIP2Q9P278 1114 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 MTRRQ9UBK8 725 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 SIX4Q9UIU6 781 aa13.14□□□□□ -0.31
VRK3-202ENST00000377011 CARNS1A5YM72 827 aa13.13□□□□□ -0.31
VRK3-202ENST00000377011 EXTL3O43909 919 aa13.13□□□□□ -0.31
VRK3-202ENST00000377011 HEXIM1O94992 359 aaKnown RBP13.13□□□□□ -0.31
VRK3-202ENST00000377011 VNN2O95498 520 aa13.13□□□□□ -0.31
VRK3-202ENST00000377011 GLUD1P00367 558 aa13.13□□□□□ -0.31
VRK3-202ENST00000377011 ADH1AP07327 375 aa13.13□□□□□ -0.31
VRK3-202ENST00000377011 RPL9P32969 192 aaKnown RBP13.13□□□□□ -0.31
VRK3-202ENST00000377011 CASP4P49662 377 aa13.13□□□□□ -0.31
VRK3-202ENST00000377011 CORO7P57737 925 aa13.13□□□□□ -0.31
VRK3-202ENST00000377011 LILRA4P59901 499 aa13.13□□□□□ -0.31
VRK3-202ENST00000377011 PTK2Q05397 1052 aa13.13□□□□□ -0.31
VRK3-202ENST00000377011 ALCAMQ13740 583 aa13.13□□□□□ -0.31
VRK3-202ENST00000377011 CBX2Q14781 532 aaPredicted RBP13.13□□□□□ -0.31
VRK3-202ENST00000377011 ADHFE1Q8IWW8 467 aa13.13□□□□□ -0.31
VRK3-202ENST00000377011 GJD3Q8N144 294 aa13.13□□□□□ -0.31
VRK3-202ENST00000377011 GPD1LQ8N335 351 aa13.13□□□□□ -0.31
VRK3-202ENST00000377011 TMEM206Q9H813 350 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms