RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CEP128Q6ZU80 1094 aa21.25■□□□□ 0.99
VSX1-202ENST00000376709 ZCCHC9Q8N567 271 aaKnown RBP21.25■□□□□ 0.99
VSX1-202ENST00000376709 KCTD6Q8NC69 237 aa21.25■□□□□ 0.99
VSX1-202ENST00000376709 NKD2Q969F2 451 aaPredicted RBP21.25■□□□□ 0.99
VSX1-202ENST00000376709 RBM15Q96T37 977 aaKnown RBP eCLIP21.25■□□□□ 0.99
VSX1-202ENST00000376709 RASSF4Q9H2L5 321 aa21.25■□□□□ 0.99
VSX1-202ENST00000376709 PLEKHA5Q9HAU0 1116 aa21.25■□□□□ 0.99
VSX1-202ENST00000376709 EFR3BQ9Y2G0 817 aa21.25■□□□□ 0.99
VSX1-202ENST00000376709 PIK3R2O00459 728 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 IFNB1P01574 187 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 SMIM10L2AP0DMW4 78 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 SMIM10L2BP0DMW5 78 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 ETS1P14921 441 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 KDELR1P24390 212 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 CDC42EP1Q00587 391 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 LCLAT1Q6UWP7 414 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 SPATS2Q86XZ4 545 aaKnown RBP21.24■□□□□ 0.99
VSX1-202ENST00000376709 C12orf29Q8N999 325 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 CENPTQ96BT3 561 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 XPO6Q96QU8 1125 aaKnown RBP21.24■□□□□ 0.99
VSX1-202ENST00000376709 OSMRQ99650 979 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 FOXP3Q9BZS1 431 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 ADAM7Q9H2U9 754 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 ASNSD1Q9NWL6 643 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 SNX9Q9Y5X1 595 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 NRCAMQ92823 1304 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 SCN1AP35498 2009 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 CST8O60676 142 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 ACAP1Q15027 740 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 TNFAIP8L3Q5GJ75 292 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 ERMARDQ5T6L9 678 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 OLFML2BQ68BL8 750 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 NOTUMQ6P988 496 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 MICALCLQ6ZW33 695 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 HSPH1Q92598 858 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 C9orf72Q96LT7 481 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 EIF2AQ9BY44 585 aaKnown RBP21.24■□□□□ 0.99
VSX1-202ENST00000376709 TRIM6Q9C030 488 aaPredicted RBP21.24■□□□□ 0.99
VSX1-202ENST00000376709 MIS12Q9H081 205 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 CXCL16Q9H2A7 254 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 SAE1Q9UBE0 346 aaPredicted RBP21.24■□□□□ 0.99
VSX1-202ENST00000376709 TPX2Q9ULW0 747 aaKnown RBP21.24■□□□□ 0.99
VSX1-202ENST00000376709 USP18Q9UMW8 372 aa21.24■□□□□ 0.99
VSX1-202ENST00000376709 GNEQ9Y223 722 aaKnown RBP21.24■□□□□ 0.99
VSX1-202ENST00000376709 RALGAPA2Q2PPJ7 1873 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 MANSC4A6NHS7 340 aaPredicted RBP21.23■□□□□ 0.99
VSX1-202ENST00000376709 A6NJR5 290 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 GPR32O75388 356 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 ATP5DP30049 168 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 MIPP30301 263 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 PSMC4P43686 418 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 TTC13Q8NBP0 860 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 ACTL9Q8TC94 416 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 SNX27Q96L92 541 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 ZMAT2Q96NC0 199 aaKnown RBP21.23■□□□□ 0.99
VSX1-202ENST00000376709 CDHR5Q9HBB8 845 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 DERAQ9Y315 318 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 HES2Q9Y543 173 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 E5RJQ4 531 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 F2P00734 622 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 CYP2C9P11712 490 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 CYP3A5P20815 502 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 OTUD4Q01804 1114 aaKnown RBP21.23■□□□□ 0.99
VSX1-202ENST00000376709 GOLGA7BQ2TAP0 167 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 OR6B2Q6IFH4 312 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 TLK2Q86UE8 772 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 RELL1Q8IUW5 271 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 SLC35B2Q8TB61 432 aa21.23■□□□□ 0.99
VSX1-202ENST00000376709 INTS9Q9NV88 658 aaKnown RBP21.23■□□□□ 0.99
VSX1-202ENST00000376709 CENPFP49454 3210 aa21.22■□□□□ 0.99
VSX1-202ENST00000376709 CD48P09326 243 aa21.22■□□□□ 0.99
VSX1-202ENST00000376709 ZNF865P0CJ78 1059 aaPredicted RBP21.22■□□□□ 0.99
VSX1-202ENST00000376709 MAGEA4P43358 317 aa21.22■□□□□ 0.99
VSX1-202ENST00000376709 ZNF143P52747 638 aaPredicted RBP21.22■□□□□ 0.99
VSX1-202ENST00000376709 STILQ15468 1287 aa21.22■□□□□ 0.99
VSX1-202ENST00000376709 GLRA4Q5JXX5 417 aa21.22■□□□□ 0.99
VSX1-202ENST00000376709 BBS12Q6ZW61 710 aa21.22■□□□□ 0.99
VSX1-202ENST00000376709 KAT2BQ92831 832 aa21.22■□□□□ 0.99
VSX1-202ENST00000376709 ARHGEF2Q92974 986 aaKnown RBP21.22■□□□□ 0.99
VSX1-202ENST00000376709 CCDC77Q9BR77 488 aa21.22■□□□□ 0.99
VSX1-202ENST00000376709 CALN1Q9BXU9 219 aa21.22■□□□□ 0.99
VSX1-202ENST00000376709 PCDH9Q9HC56 1237 aa21.22■□□□□ 0.99
VSX1-202ENST00000376709 TUBGCP4Q9UGJ1 667 aa21.22■□□□□ 0.99
VSX1-202ENST00000376709 PPEF2O14830 753 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 KIAA0754O94854 1291 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 CYP2B6P20813 491 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 GPD1P21695 349 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 CYP4F22Q6NT55 531 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 CHADLQ6NUI6 762 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 FAM183BPQ6ZVS7 135 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 CPLX4Q7Z7G2 160 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 EXOC3L1Q86VI1 746 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 RFX6Q8HWS3 928 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 BEST2Q8NFU1 509 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 MRPL45Q9BRJ2 306 aaKnown RBP21.21■□□□□ 0.99
VSX1-202ENST00000376709 SAYSD1Q9NPB0 183 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 CTNNAL1Q9UBT7 734 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 TRPM7Q96QT4 1865 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 SMIM35A0A1B0GVV1 85 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 TRUB2O95900 331 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms